PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000087.1_g590.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 362aa MW: 39163.1 Da PI: 8.8869

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000087.1_g590.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.7	2.9e-39	79	139	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nkks+ Pav_sc0000087.1_g590.1.mk 79 PETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKSK 139 67899*****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MVFSSIPVYL DPPNWHQQPN HHQLGSTTTG NENPLELPPL PPPPLTHVGG QGSTGGGGPG 60 SIRPSSMSDR ARMAKIPQPE TALKCPRCES TNTKFCYFNN YSLSQPRHFC KTCRRYWTRG 120 GALRNVPVGG GCRRNKKSKS NSSSSSRSKS PAATSTDHIQ TGSNSSDHHM IDTHLSQLPQ 180 ATHQSLPFLA STIQSLGRYG GAGNMGLNFN EIQQGQTDHH HHMGFQFHQI GGNNINNLNG 240 GILGGDNQWR NLNLQQIPFL GGCGFDSSPS TGLYQFQTGD QGVDHHHQAP TDPMAANNSR 300 VNNTGDHLPP PVKVEGNRGL SLTRPSLGTN ISENNNNQFW GGNLNSWTDL SGLNSSSTSH 360 LL

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MVFSSIPVYL DPPNWHQQPN HHQLGSTTTG NENPLELPPL PPPPLTHVGG QGSTGGGGPG  60
SIRPSSMSDR ARMAKIPQPE TALKCPRCES TNTKFCYFNN YSLSQPRHFC KTCRRYWTRG  120
GALRNVPVGG GCRRNKKSKS NSSSSSRSKS PAATSTDHIQ TGSNSSDHHM IDTHLSQLPQ  180
ATHQSLPFLA STIQSLGRYG GAGNMGLNFN EIQQGQTDHH HHMGFQFHQI GGNNINNLNG  240
GILGGDNQWR NLNLQQIPFL GGCGFDSSPS TGLYQFQTGD QGVDHHHQAP TDPMAANNSR  300
VNNTGDHLPP PVKVEGNRGL SLTRPSLGTN ISENNNNQFW GGNLNSWTDL SGLNSSSTSH  360
LL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	8e-43	Dof family protein