PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000086.1_g110.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 516aa    MW: 60211.9 Da    PI: 8.9402
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000086.1_g110.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM104.11.8e-32231483127
                        NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWka 85 
                                p +rF+P+deel++++Lk+k++g++l+++ +i+e+  y++ P +L  + + a++ke+yfF++ ++k + ++ ++r++++gyW  
  Pav_sc0000086.1_g110.1.mk  23 PEVRFQPKDEELITHFLKRKISGDPLPVNIIIDELSFYEYSPIQLSkMYAFANQKELYFFTPVERKFTDSTLPRRKARNGYWIP 106
                                669*************************999**************8334445788***************************** PP

                        NAM  86 tgkdkevlskkgelvglkktLvfykgrapk.gektdWvmheyr 127
                                t k +++ + ++e +g+kk+L fy gr ++ ++kt+W+m ey 
  Pav_sc0000086.1_g110.1.mk 107 TSKYENIEQ-GTEIIGVKKSLRFYAGRPRSaSTKTNWTMLEYI 148
                                *******99.999***********998766156*********6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 516 aa     Download sequence    
MDSFEEENQS TMASEQYYMS LHPEVRFQPK DEELITHFLK RKISGDPLPV NIIIDELSFY  60
EYSPIQLSKM YAFANQKELY FFTPVERKFT DSTLPRRKAR NGYWIPTSKY ENIEQGTEII  120
GVKKSLRFYA GRPRSASTKT NWTMLEYIAG GTAAVSQSPY FLYDWVLCKV YEEELSAKKV  180
PESNNQGNAA NEEVTGEQLH SHIRTSPLED LFRAKKRRRL SENSGQLPLT ICTSSYRRPC  240
LPELPFEVII EILSRLPVES VLRFKCVCRQ WCSTFQEEDF IAKHRVRASP LRLPYRYMWD  300
YNNSVSFYDE NFKLIGNSCG LFLEKNYSTQ VFRIRNFAMH QVLYLPHAPN AYINTMCFVL  360
NLSTGECKVA YFYIKGNLAP EVGLKVLTVG IDCQWRPLKL SNQTIRGQHK KYLRKRHILK  420
PNQTEGAAHY VEIIRAGQDL YLEDNPSLKN QIWAPVRVIY GKLELQGEKS FLTYDMEREI  480
VTRIEVGNDS DREHFASHKP SLLTFKGMRP KRVRCD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1216220KRRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.12e-29NAC family protein