PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000071.1_g750.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 278aa    MW: 30567.1 Da    PI: 8.1274
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000071.1_g750.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2651.6e-20123172255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                                +y+GVr ++ +g+W+AeIrdp     r  +r++lg+f taeeAa+a+++a+ +++g
  Pav_sc0000071.1_g750.1.mk 123 KYRGVRKRP-WGKWAAEIRDP-----RqaARVWLGTFETAEEAARAYDKAAIEFRG 172
                                8********.**********9.....336***********************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MPLHANRIQQ KQEHCIMVSA LKHVISGGIT AGGSRPTSQQ QQQLTGAVHS ATSSVPSRRD  60
GTQSATDQVH MLSFSAEGDT CRVCGIEGCL GCNYFPSTTL PDRNKQLNLG SGANAGTRKG  120
KNKYRGVRKR PWGKWAAEIR DPRQAARVWL GTFETAEEAA RAYDKAAIEF RGDKAKLNFP  180
LTSSDQLSNI TNNNITSSSR TKTSSQLIRS MEEADQGKVN PITVKQSEKM EMFESSAPQE  240
ENDQFLWDML QDGDDDDELK AWMSANYNTS CSALMKPG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.11e-29ERF family protein