PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000071.1_g690.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HSF | ||||||||
Protein Properties | Length: 243aa MW: 27165.5 Da PI: 9.8484 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 117.6 | 7.5e-37 | 24 | 115 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhks 85 Fl+k+y++++d++ +++isw+e+g++fvv+++ +fa+++LpkyFkh+nf+SFvRQLn+YgF+k+ ++ weF++++ Pav_sc0000071.1_g690.1.mk 24 FLTKTYQLVDDPSWDDVISWNESGTTFVVWKTVDFARDMLPKYFKHNNFSSFVRQLNTYGFRKTVPDQ---------WEFANDN 98 9***************************************************************9998.........******* PP XXXXXXXXXXXXXXXXX CS HSF_DNA-bind 86 Fkkgkkellekikrkks 102 F++g+kell++i+r+ks Pav_sc0000071.1_g690.1.mk 99 FRRGQKELLSEIRRRKS 115 ***************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MAQRSVPAPF LTLKMAQRSV PAPFLTKTYQ LVDDPSWDDV ISWNESGTTF VVWKTVDFAR 60 DMLPKYFKHN NFSSFVRQLN TYGFRKTVPD QWEFANDNFR RGQKELLSEI RRRKSVTSGT 120 GKVTASEKSG GPSTPSNSGE EMASTSTSSS DSKNPGSVET AAMGQASDLS GENEKLKKEN 180 ENLSSELSQT KKQCDELVRF LMDYLKRTER DEKFGVGVGG TYAKKMKRAE FGAPMMKSGK 240 VCN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36990.1 | 4e-70 | HSF family protein |