PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000069.1_g830.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 344aa    MW: 37700 Da    PI: 8.6405
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000069.1_g830.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.63.6e-18210243134
                       GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                                Cs C+t +TplWR+gp g+k+LCnaCG+++rk +
  Pav_sc0000069.1_g830.1.mk 210 CSDCHTNSTPLWRSGPLGPKSLCNACGIRQRKAR 243
                                *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MMTPVYLNPA SSPFSMVEQA EDQRLKLFIS PPYDEAASCT SFPFPTFFDS LQDQTPGTTF  60
TSLAHHQSQL YHHKDKNIWD CGTSYDQASS SSSLVQAHVV DAISNKDRRL SGCGDHDRDT  120
NIGGGGGGEE EGKSSNYITT TRPKSVKWMS SKMRLMQKMT SNNPDLPPGT TDHIPAEISE  180
HKFQNHAQPR ENSETSFSSN SNNTAAVRVC SDCHTNSTPL WRSGPLGPKS LCNACGIRQR  240
KARRAMAEAE AAAANGFSVG SADTSSPKGK VAKEKKSRGN HKNKISKLII TDNASISHNN  300
KKNNNNKKKI CFKDLDFQRV FPQDVAEAAM LLMELSCGLI NNHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.14e-21GATA family protein