PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000044.1_g1010.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

SRS

Protein Properties

Length: 271aa MW: 28433 Da PI: 4.8259

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000044.1_g1010.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	90.6	3.4e-28	126	187	104	154
DUF702 104 s...........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +P+evss+avfrcvrvss++d+++++aYqtav+igGh+fkGiLydqG+e+ Pav_sc0000044.1_g1010.1.mk 126 GggtaswlelgnFPAEVSSPAVFRCVRVSSIEDDDDQYAYQTAVNIGGHLFKGILYDQGPET 187 033344444555************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MAGFFSLGRG GNNNHQDQDH HNSNNPPPPD HQIAPETFWY KNEDVAAQPY KGFELWQQQE 60 QLLQLQTQPP RLFHHHPHHH QDLYASAAAL GVGPSSRGSD DTSSSRSAAA LMMMRSSSGG 120 GAGGSGGGTA SWLELGNFPA EVSSPAVFRC VRVSSIEDDD DQYAYQTAVN IGGHLFKGIL 180 YDQGPETSNY NMNMAAAAAA AETSSGGGGV NIQPLNLIAG ATTAANTATI GGGDDEGVAG 240 ASTTVIDPSS LYPAPLNTYM AGTQFFLPPR S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66350.1	3e-32	SRS family protein