PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000038.1_g350.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 276aa    MW: 30162.9 Da    PI: 4.5745
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000038.1_g350.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11e-1889138255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                 y+GVr ++ +grWv+eIr+p++   + r++lg++ tae+Aa+a++ a+++++g
  Pav_sc0000038.1_g350.1.mk  89 TYRGVRMRS-WGRWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAALAIKG 138
                                69****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MAKQINIESD AQENLLTSSS SSSSSSSSTT TTTSDSLADK NTQNSENCTS KKGSSIKGQE  60
EPNNENEQDN SMKKKRQRSS DQSDGKHPTY RGVRMRSWGR WVSEIREPRK KSRIWLGTYP  120
TAEMAARAHD VAALAIKGAS AFLNFPELAQ TFPQPDSKSP KDIQAAAAKA AAAAADASEE  180
KQIICEAEAE EAEPSSKVKL PMSSNSTLSM DNINAQESTS TCASTDYDDD KLFDLPDLFM  240
DGTNGSDQFC YSSSSTWHLC AADTGFRLED PFLWEY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17378KKKRQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.17e-54ERF family protein