PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000012.1_g130.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 102aa MW: 11417.1 Da PI: 5.0638 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 35 | 2.6e-11 | 19 | 76 | 37 | 95 |
EEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE.E-SS.SEE..EEE CS B3 37 tledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk.ldgr.sefelvvk 95 t+ + +g+ We+ + ++s+ y ++W+ F+ +n+Lk+gD +vF+ l+ + + l+v+ Pav_sc0000012.1_g130.1.mk 19 TVLTFRGKNWEMIY--HGSSS-YKRLDNWRAFAIDNNLKVGDACVFEqLECSnARLVLRVQ 76 567789********..66665.55555********************55543355555555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 102 aa Download sequence |
MNVVPGKFSA TLPSCSIPTV LTFRGKNWEM IYHGSSSYKR LDNWRAFAID NNLKVGDACV 60 FEQLECSNAR LVLRVQILRG DIPSEFLDKL DGDNVDAPVV LE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33280.1 | 7e-07 | B3 family protein |