PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000008.1_g430.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bZIP

Protein Properties

Length: 503aa MW: 54115.7 Da PI: 8.9747

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000008.1_g430.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	68.5	1.1e-21	400	462	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L++e+++++ e+++l se+ Pav_sc0000008.1_g430.1.mk 400 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENATLRSEVSRIRSEYEQLLSEN 462 89**********************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MGSSEMDKPA KEKEKELKTT PASTQEQSAT TSAGTVNPDW SGFQAYSPIP PHGFLASSPQ 60 AHPYMWGVQH IMPPYGTPPH PYVAMYPHSG LYAHPSMPPG SYPFSPFAMP SPNGIVEASG 120 NTPGSMEADG KPSEVKEKLP IKRSKGSLGS LNMITGKNNE PGKTSGASAN GVHSKRHSRL 180 EEKKNGGRGQ LIKTSMKVIA KLSNLVIMNC GIDNFFAESA SEGTSEGSDA NSQSIKWPLG 240 CYIKPTVGSK LLVDVALTVI EDSQLKSGGR QDSLEGDASQ NGSSAHGSQN GAPNTHTMLN 300 QTMAIMPITA AGASSAVPGP ATNLNIGMDY WGAPPSSGVP AMRGKVPTTP VTGGLVTAGS 360 RDSVQSQLWL QVNLCYFIDL IKKGEKNLHF EYLVGVVRDE RELKRQRRKQ SNRESARRSR 420 LRKQAECDEL AQRAEALKEE NATLRSEVSR IRSEYEQLLS ENASLKEKLG EIPGHEDPRS 480 ARSDQKLSND TKQIAQTEVH GGQ

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MGSSEMDKPA KEKEKELKTT PASTQEQSAT TSAGTVNPDW SGFQAYSPIP PHGFLASSPQ  60
AHPYMWGVQH IMPPYGTPPH PYVAMYPHSG LYAHPSMPPG SYPFSPFAMP SPNGIVEASG  120
NTPGSMEADG KPSEVKEKLP IKRSKGSLGS LNMITGKNNE PGKTSGASAN GVHSKRHSRL  180
EEKKNGGRGQ LIKTSMKVIA KLSNLVIMNC GIDNFFAESA SEGTSEGSDA NSQSIKWPLG  240
CYIKPTVGSK LLVDVALTVI EDSQLKSGGR QDSLEGDASQ NGSSAHGSQN GAPNTHTMLN  300
QTMAIMPITA AGASSAVPGP ATNLNIGMDY WGAPPSSGVP AMRGKVPTTP VTGGLVTAGS  360
RDSVQSQLWL QVNLCYFIDL IKKGEKNLHF EYLVGVVRDE RELKRQRRKQ SNRESARRSR  420
LRKQAECDEL AQRAEALKEE NATLRSEVSR IRSEYEQLLS ENASLKEKLG EIPGHEDPRS  480
ARSDQKLSND TKQIAQTEVH GGQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	417	423	RRSRLRK
2	417	424	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32150.1	2e-86	bZIP family protein