PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_co4072069.1_g010.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family YABBY
Protein Properties Length: 90aa    MW: 10202.5 Da    PI: 5.5595
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_co4072069.1_g010.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY73.57.2e-23237135170
                      YABBY 135 eeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                                +eiqrik+ nPdishreafsaaaknWahfP+ihfgl
  Pav_co4072069.1_g010.1.mk   2 DEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGL 37 
                                8*********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
RDEIQRIKSV NPDISHREAF SAAAKNWAHF PHIHFGLMPD QTVKKTNVRQ QEGEDVLMKD  60
GENCKLQAAS CCSFDVFVVV VEEKQNCDDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.12e-30YABBY family protein