PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_co4059935.1_g010.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 251aa MW: 28183.8 Da PI: 7.5383

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_co4059935.1_g010.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.2	5.9e-13	81	127	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+E+rRR+riNs +++Lr llP + K +Ka+ L k+v+ +k+L Pav_co4059935.1_g010.1.mk 81 KNHKEAEKRRRERINSHLDKLRGLLPCN-----SKTDKASLLAKVVQRVKEL 127 58***********************8.....7**********999988 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MQPADHQNQE FYRFLAQNGL INVNNNNGSY VGFPGGASCD QFSALQSFCS SSSYNYYPLE 60 GSGVSTEHET SPQDRALAAL KNHKEAEKRR RERINSHLDK LRGLLPCNSK TDKASLLAKV 120 VQRVKELKQQ TSELTELESF PSETDEITVL SSDDYSSDGR IIFKASLCCE DRTDLLPDLI 180 EILKSLHLKT LKAEMATLGG RIRNVLIVAA DKDHTIESVH FLQNALKSLL ERSNASERSK 240 RRRVLDRTLV L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	240	244	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41130.1	3e-85	bHLH family protein