PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_co4053135.1_g010.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 225aa MW: 25097.4 Da PI: 9.6022 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 50.3 | 4.7e-16 | 175 | 215 | 21 | 60 |
-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 21 prsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60 rsYY+C+s gCp++k+ver+ edp+++++tYeg+H+h+k Pav_co4053135.1_g010.1.mk 175 RRSYYKCSSVrGCPARKHVERCFEDPTMLVVTYEGDHQHPK 215 69******988****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
NQKRIRRGPL PKSHDINQVE LLDSPNPSPQ NTTHNWPQPH PQPQPQNCLV RQFFSAVHQS 60 DQATANVIHS NSFSMGREKK PKPALQQGQS EAGVVLPNNL IMGLNQFSQK PTSTSLISMD 120 GSSLNTRMIH YSSSELLASR DCTSMFSSKR KCQVKSEEAT PRCLVSAGGC HCSKRRSYYK 180 CSSVRGCPAR KHVERCFEDP TMLVVTYEGD HQHPKITFQA PTVAI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30590.1 | 2e-21 | WRKY family protein |