PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_co4007921.1_g010.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SBP
Protein Properties Length: 307aa    MW: 33818.8 Da    PI: 9.5154
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_co4007921.1_g010.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP39.81.2e-121285178
                               ETTT--SS--S-STTTT-------S--- CS
                        SBP 51 elsefDeekrsCrrrLakhnerrrkkqa 78
                               +l efD++krsCrrrLa+hnerrrk+q+
  Pav_co4007921.1_g010.1.br  1 QLPEFDQGKRSCRRRLAGHNERRRKPQP 28
                               589**********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
QLPEFDQGKR SCRRRLAGHN ERRRKPQPGS ILSARFGRLS SSIYENSSRV GSFLMDFTAY  60
PRHSGRDAWE TTRTSEWVPG NQNSNDTGKF LQHPWQSNSE ITPSGLYLQG SAGGTSYPGP  120
GIPPGECVTG VTDSSCALSL LSSQPWGSRN RVSGVGMNTV VNTQGPPVGQ PITHAGTSNH  180
FPTTSWGFKG NAGSSHEMLP DLGLGQISQP PLSTQYSGVL ELSQQSSRRQ QQMELGHTRG  240
FDTSSQHIHW SLSNRSLGSP VHMNALLLGL KTLEPFEGFI MFCWVENLNW LCFVVYVLLR  300
LRRSESK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42200.18e-32SBP family protein