PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO03874.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Trihelix

Protein Properties

Length: 310aa MW: 35444.7 Da PI: 5.8225

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO03874.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	33.2	1.3e-10	20	99	2	81
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 W+ l L++ +e + ++ + ++W + ++++++ ++r+ +qC+ kw++l +y +ik++e+k +s++ss +++ POO03874.1 20 WSAMDALILVNEIAAVEADCLKALSSFQKWMIITENCAAQDVNRNLNQCRRKWDSLLLDYNRIKQWESKSKSRASSYWSL 99 7777777888888888888888889999*****************************************99999999975 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MAHERSSGSR RTRSQVAPDW SAMDALILVN EIAAVEADCL KALSSFQKWM IITENCAAQD 60 VNRNLNQCRR KWDSLLLDYN RIKQWESKSK SRASSYWSLK TDRRGSLGLP RDFDDELFLA 120 IENLVNTREN QADTDPDSDA EANDDKVDLV EELGSKRQRR QLISEETREW KSVAEAKPMK 180 GQAERKPPKS LVEKNPVVHS MRETSVRSPP EEKLPQRSSK KNEPQKGHVE EFETIGNEEK 240 EQMIAFILHE NAEMIKSIVS KNAEYEAAQA ENGENCQTKS AEFVRRQGHK LIACLGEIVK 300 SLDQVRDFVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	3e-64	Trihelix family protein