![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | POO03581.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
|
||||||||
Family | NF-YC | ||||||||
Protein Properties | Length: 245aa MW: 28346.2 Da PI: 4.9871 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 133.4 | 7.2e-42 | 64 | 168 | 2 | 98 |
NF-YC 2 lksfwekq........iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ++ fw++q + ++ +h+lPlarik+++kad dvkmisa++P l+skacelfi+eltlrsw+++ee+krrtl+++dia a+ + + dfl POO03581.1 64 MEIFWNQQlldmqnilVCNTVGKSQHQLPLARIKRVMKADGDVKMISADTPLLFSKACELFIMELTLRSWMQTEECKRRTLQRCDIARAIRNDELLDFL 162 6789999976644433333344469************************************************************************** PP NF-YC 93 vdivpr 98 vd+vp POO03581.1 163 VDVVPL 168 ****96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 245 aa Download sequence |
MDMNQSMNFI PSSSNSDPQL PNMMMPMGDS FMLPEYYQQG MMSAKQDAEE ARRSHTKQVQ 60 KQNMEIFWNQ QLLDMQNILV CNTVGKSQHQ LPLARIKRVM KADGDVKMIS ADTPLLFSKA 120 CELFIMELTL RSWMQTEECK RRTLQRCDIA RAIRNDELLD FLVDVVPLSH DHHYGQKEQE 180 STGKNVLDAN ESSYTTAHEP LNLPIMNNFE ENETVPIIQE TPQQFMFDPS MSSAEFHYHF 240 PSKVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G56170.1 | 5e-37 | NF-YC family protein |