PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | POO03475.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | ERF | ||||||||
Protein Properties | Length: 399aa MW: 44346.7 Da PI: 4.3076 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.2 | 2.3e-19 | 51 | 100 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y GVr+++ +grWvAeI+d ++ r++lg+++taeeAa+a+++a+ l+g POO03475.1 51 RYVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTYDTAEEAARAYDEAACLLRG 100 79*******.7*********33....35**********************99998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 399 aa Download sequence |
MVRKRKGCDQ EEEARESSNE IPIGDMGWNQ TMETTSPPPA VLYGAARARK RYVGVRQRPS 60 GRWVAEIKDT IQKIRVWLGT YDTAEEAARA YDEAACLLRG ANTRTNFWPC SPSPHSKPAL 120 PSRIANLLLL RLKARNSNNN NNNNACASLP FSLPCNQQDQ AVEDHNGDTL FGNLFNEPEF 180 CAMKEDHSDS LTNNISDITT ADYTTENFEW SLVGTDDSSA NGASFDGETN QCEGEKEEDY 240 DQMGVMDLRF VDTVESFSGF FCPFEIAEEM IEPMETEKHE DEESIIGEAM KRMKYERKFS 300 ASLYAFNGVS ECLRLKLGSK AETDGELSIL KNEPKVEDKK SNEDYMDETV EGRVQEQVVM 360 NLQSPSDMGS LSSSSSYSSS SSSTLSSSSS SVSPEGEGH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 2e-18 | ERF family protein |