PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO03475.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 399aa    MW: 44346.7 Da    PI: 4.3076
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO03475.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.3e-1951100255
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y GVr+++ +grWvAeI+d      ++ r++lg+++taeeAa+a+++a+  l+g
  POO03475.1  51 RYVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTYDTAEEAARAYDEAACLLRG 100
                 79*******.7*********33....35**********************99998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    
MVRKRKGCDQ EEEARESSNE IPIGDMGWNQ TMETTSPPPA VLYGAARARK RYVGVRQRPS  60
GRWVAEIKDT IQKIRVWLGT YDTAEEAARA YDEAACLLRG ANTRTNFWPC SPSPHSKPAL  120
PSRIANLLLL RLKARNSNNN NNNNACASLP FSLPCNQQDQ AVEDHNGDTL FGNLFNEPEF  180
CAMKEDHSDS LTNNISDITT ADYTTENFEW SLVGTDDSSA NGASFDGETN QCEGEKEEDY  240
DQMGVMDLRF VDTVESFSGF FCPFEIAEEM IEPMETEKHE DEESIIGEAM KRMKYERKFS  300
ASLYAFNGVS ECLRLKLGSK AETDGELSIL KNEPKVEDKK SNEDYMDETV EGRVQEQVVM  360
NLQSPSDMGS LSSSSSYSSS SSSTLSSSSS SVSPEGEGH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-18ERF family protein