PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO03330.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

G2-like

Protein Properties

Length: 469aa MW: 51111.4 Da PI: 7.6178

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO03330.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.7	4.7e-32	281	334	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ POO03330.1 281 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 334 9****************************************************7 PP
2	Myb_DNA-binding	46.4	9.2e-15	282	333	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ POO03330.1 282 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 333 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MPLEGIFIEA ASSTPAVLPD LSLHISPPNI STTCSSSAAA AAAAAAVDDA RFDLDLSSRK 60 RELDSNNSTT GTTTNTSKAQ TDLSLGRLNF TPKGAVDHPP QNPYQQLHAH HPHPHHHHLN 120 HTINNRGGGG LSLLDVSAAT GADAFRPIKG IPVYHNRSFP FLSADNTRVD NHVKDPKMCF 180 YQMAPSLSSA TPYYGGGGGL DPMSSAAAYR AARLNGLAAA AEAFKSANQL HHNQVHQHQH 240 HHHHLHHHHN QYGQAESTGP HGTMRTRFLP KLPTKRSMRA PRMRWTSTLH ARFVHAVELL 300 GGHERATPKS VLELMDVKDL TLAHVKSHLQ MYRTVKTTDK PAASSGQSDG SGEDEMSQMG 360 MSGSDSTGAL RTQYADQRGP SDRSNLQPDH MDYQSTSLWS NSSSGREVWS QNNNGDIDGH 420 PLQSSVISQQ IQECDSTGRK NYVENNNFEG KNPSLEFTLG RPGWHSEPI

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MPLEGIFIEA ASSTPAVLPD LSLHISPPNI STTCSSSAAA AAAAAAVDDA RFDLDLSSRK  60
RELDSNNSTT GTTTNTSKAQ TDLSLGRLNF TPKGAVDHPP QNPYQQLHAH HPHPHHHHLN  120
HTINNRGGGG LSLLDVSAAT GADAFRPIKG IPVYHNRSFP FLSADNTRVD NHVKDPKMCF  180
YQMAPSLSSA TPYYGGGGGL DPMSSAAAYR AARLNGLAAA AEAFKSANQL HHNQVHQHQH  240
HHHHLHHHHN QYGQAESTGP HGTMRTRFLP KLPTKRSMRA PRMRWTSTLH ARFVHAVELL  300
GGHERATPKS VLELMDVKDL TLAHVKSHLQ MYRTVKTTDK PAASSGQSDG SGEDEMSQMG  360
MSGSDSTGAL RTQYADQRGP SDRSNLQPDH MDYQSTSLWS NSSSGREVWS QNNNGDIDGH  420
PLQSSVISQQ IQECDSTGRK NYVENNNFEG KNPSLEFTLG RPGWHSEPI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	4e-62	G2-like family protein