PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO03287.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 312aa    MW: 35618.9 Da    PI: 5.7316
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO03287.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.82.5e-05184227654
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                 +++ r RR++i ++ +eL +l+P  +      K + ae+   A  YIk L
  POO03287.1 184 SIAARERRRKITEKTQELGRLIPGgN------KKNTAEMFHAASMYIKFL 227
                 67889******************944......788899999999999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MALSFCSNWG THSLQHLLNQ EIFSFPQTQL LELESEIESP QYLFDNFDSD FSLPDTSIDP  60
IFFETSYNSS YSNKIYNDIL IPNFHNPTHN LVPDHDNFSP QTTLSHPKRQ KMYQNQCPFN  120
ATTSEFSKGY FPDPGLIQEF LPHPHNHDNV IHVPPQVVYS CGNKETEVKK QSSCSSTTVL  180
SAQSIAARER RRKITEKTQE LGRLIPGGNK KNTAEMFHAA SMYIKFLRAQ LAILQLIESF  240
EEKKQGTSYI KELEVLASPS VQEKLYSEEK CLVPKEFVQT LANDQEIRSK PFFDDISQLI  300
HANQSMAAVT SD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.13e-30bHLH family protein