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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | POO03155.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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| Family | BES1 | ||||||||
| Protein Properties | Length: 339aa MW: 36836.5 Da PI: 9.124 | ||||||||
| Description | BES1 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | DUF822 | 214.2 | 3.3e-66 | 13 | 152 | 1 | 143 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslk 99
++++rkp+w+ErEnn+rRERrRRaiaakiyaGLRaqGny+lpk++DnneVlkALc eAGw+ve+DGttyrkg+kpl ++ag+s++++p +s++ s+
POO03155.1 13 AAARRKPSWRERENNRRRERRRRAIAAKIYAGLRAQGNYNLPKHCDNNEVLKALCVEAGWTVEEDGTTYRKGCKPL-PIDVAGTSSRMTPYTSQNPSPL 110
5899************************************************************************.9********************* PP
DUF822 100 ssalaspvesysaspksssfpspssldsislasaasllpvlsvl 143
ss+++sp++sy+ sp+sssfpsps+ld + ++l+p+l++
POO03155.1 111 SSSFPSPIPSYQVSPSSSSFPSPSRLDGSYNP--SNLIPYLQNA 152
***************************98665..7888888875 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 339 aa Download sequence |
MTSDGATSAA AAAAARRKPS WRERENNRRR ERRRRAIAAK IYAGLRAQGN YNLPKHCDNN 60 EVLKALCVEA GWTVEEDGTT YRKGCKPLPI DVAGTSSRMT PYTSQNPSPL SSSFPSPIPS 120 YQVSPSSSSF PSPSRLDGSY NPSNLIPYLQ NAIPSNLPPL RISNSAPVTP PLSSPTSRNP 180 KPIPTWEAIA RQSMASFKYP FYAVSAPASP TRHQIHIPAA TIPECDESDT STVDSGQWVS 240 FQKFAPSAST MPTSPTFNLV KPAAQPISTS NVIPEAVRGA EFDFGGGQVK PWVGERIHEV 300 GMEMEMDDLE LKLGSSKAEV KASGGMQSIC LIKEREKDW |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 16 | 35 | RRKPSWRERENNRRRERRRR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G19350.3 | 1e-121 | BES1 family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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