PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02835.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 353aa    MW: 38718.9 Da    PI: 6.1023
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02835.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.55.1e-21160210256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+ge
  POO02835.1 160 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRGE 210
                 59******9.**********965...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MAAAIDIYSS SQTQVFSDPF REELMKALEP FMKSASPVSP STPSSSSSSS SSSYPSCSYS  60
PVSSTQPKLY PETQGFSTQM GFEPQTGSLG LNQLTPSQIL QIQAQIYFQQ QQQQKQQMAA  120
IAKTTVHNQW QSQNTQTLNY LSPKAIPMKH VGTPPKPNKL YRGVRQRHWG KWVAEIRLPK  180
NRTRLWLGTF DTAEEAALAY DKAAYKLRGE FARLNFPHLR HEGAHVSGDF GNYKPLHSSV  240
DAKLQAICQN LANNSQKQGN SGESCSEAEV KPTIVPAPLE AKVVSDNSSN GEPKAELEAS  300
SSSSPLSDES SAGSSSPESD VTLLDFSSDS HWDDTQSFEL GKYPSVEIDW DAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39780.17e-57ERF family protein