PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02812.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 248aa    MW: 26894.8 Da    PI: 10.4649
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02812.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.5e-08152192954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  POO02812.1 152 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 192
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MEKTSPEFCD PYQNTTAAPT FLDMNFSDGT TAAQPGFASA TTTETAALLN NMNPANSNIP  60
FLGGGGGGNP IQEPVTPPPF QPNAALSGGR IFKTVGAIAV PNPHEKRNSM AAMREMIFRI  120
AAMQPIHIDP ESIKPPKRRN VKISKDPQSV AARHRRERIS ERIRILQRLV PGGTKMDTAS  180
MLDEAIHYVK FLKKQVQTLE QAGANRPTAA AAVGFPGTHL GNLNYSAFFK ACQPSNSPMP  240
DQSLRMLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.17e-43bHLH family protein