PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02785.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 483aa    MW: 53538.7 Da    PI: 8.5282
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02785.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B361.71.2e-19117207199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 f+k l++s+v +  ++ lp +f+++h  +  +++t+tlede+g++ ++k+i  k++    l++GW++F+ a++L egD++vF+l++ ++f  +v ++r+
  POO02785.1 117 FVKSLVRSHVASCFWMGLPGQFCKTHLPD--KDTTITLEDENGKQNNIKYIAYKTG----LSAGWRQFAVAHKLLEGDVLVFQLVEPTKF--KVYIIRA 207
                 89************************534..5679***************666665....9**********************9876666..9999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 483 aa     Download sequence    
METASFELKS AEEEDVTLAQ LSKSPMPKLK PSSSSSSSRA KTKNPNEKEQ KLSNVKNRNS  60
DVQIKFVLSG HARNSLSSKP SKDSIQGLSS ASGQARSSAV IRAQEVRSNL ETEFPSFVKS  120
LVRSHVASCF WMGLPGQFCK THLPDKDTTI TLEDENGKQN NIKYIAYKTG LSAGWRQFAV  180
AHKLLEGDVL VFQLVEPTKF KVYIIRANGL TEVDGALGLL NLDSHTKPSD ADKDNAEMDA  240
LECYNTNRKR PKSLPLSVVE KKKKKAGLPR SSPKPGEQSE NDSEEVGSEV LEGSKINGPT  300
IEFKDIKNFG NFSILVDGLL VDSELPEDIR RTYYKLCCSQ NAFLHDNVIK GMNHKLIVGI  360
ISETVNVANA IKACKLNTSR DDFASWDNFL KAFELLGMNV GFLRARLSQL AGLAYESEVC  420
LDARKYAESR KERARAESGM KKIETKIAEL REACDRFGAA IQKLGSQAES YEQKFHEEVT  480
APW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1248265RKRPKSLPLSVVEKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.15e-39B3 family protein