PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO02741.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

G2-like

Protein Properties

Length: 394aa MW: 43616.5 Da PI: 6.4337

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO02741.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.6	1.1e-31	262	317	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+ eLH+rFv+a++qLGGs+ AtPk+i+elm v+gLt+++vkSHLQkYRl+ POO02741.1 262 KQRRCWSIELHRRFVDAIHQLGGSQAATPKQIRELMRVEGLTNDEVKSHLQKYRLH 317 79****************************************************97 PP
2	Myb_DNA-binding	44	5.1e-14	264	315	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++vda++qlGg t+k I + m +g+t ++ks++qky+ POO02741.1 264 RRCWSIELHRRFVDAIHQLGGSqaaTPKQIRELMRvEGLTNDEVKSHLQKYR 315 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MELSLNSSMV FVPKTISEFL AEVSTIRNGS EKLSKLDDYV QRFEEERRKI DAFKRELPLC 60 MSLVNDAILR LKEEEKAIKC SGSRDGQATE EFISLKGNSD EDGSVNLGPD STDKRSWMSS 120 AQLWSTNVDY GSQKQNPVSE LKPIIEEEDD RSVPENPVAV CDYRNRAGAF VPFKGQSSPC 180 GVLRTVTKED KEVSLSRVPS LSLMPPAPMA ELGRNSDSNP KSSHSCRAGS GSSFLTEQVK 240 LASKPQEVQT QHQQQQQQPF RKQRRCWSIE LHRRFVDAIH QLGGSQAATP KQIRELMRVE 300 GLTNDEVKSH LQKYRLHVRK LPNSSAEAAS GLWMTRDQCG DNSNQSASPQ GPLAASGSNK 360 ALSHTGGDST EAEEDEKSDG HSWRGGNHKA GEDV

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MELSLNSSMV FVPKTISEFL AEVSTIRNGS EKLSKLDDYV QRFEEERRKI DAFKRELPLC  60
MSLVNDAILR LKEEEKAIKC SGSRDGQATE EFISLKGNSD EDGSVNLGPD STDKRSWMSS  120
AQLWSTNVDY GSQKQNPVSE LKPIIEEEDD RSVPENPVAV CDYRNRAGAF VPFKGQSSPC  180
GVLRTVTKED KEVSLSRVPS LSLMPPAPMA ELGRNSDSNP KSSHSCRAGS GSSFLTEQVK  240
LASKPQEVQT QHQQQQQQPF RKQRRCWSIE LHRRFVDAIH QLGGSQAATP KQIRELMRVE  300
GLTNDEVKSH LQKYRLHVRK LPNSSAEAAS GLWMTRDQCG DNSNQSASPQ GPLAASGSNK  360
ALSHTGGDST EAEEDEKSDG HSWRGGNHKA GEDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37180.1	2e-72	G2-like family protein