PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO02691.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Protein Properties

Length: 404aa MW: 46072.5 Da PI: 10.2742

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO02691.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	54.8	1.7e-17	22	112	2	99
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 fk+ +d+l+++ l++pk+f++++g k+ s ++++ + g +W++kl + ++++++l +GW eFv+ + g ++F+++g+s+f +v vf++ POO02691.1 22 FKII-LEDTLRENKLRVPKDFVKKCG--KTLSNSVSVKLPCGSEWKMKL--TEYDNKVWLDNGWPEFVEHYSIGRGNLLTFRYEGNSQF--HVVVFDT 112 4444.489999999*********9..558999***********..******************************9*..9999986 PP
2	B3	67.4	2e-21	268	365	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ffk+l+++++ +rl++p +fae++ k++s+ ++l+ ++gr+W v+++ + ++ +++GWkeFv+ n++++gD++vF l + + e+ v +f POO02691.1 268 FFKILMQPSYVHGSRLTIPPNFAERYI--KRKSRNVILKVLDGRTWPVRYTLgvYDRLKTARFRSGWKEFVRNNNIEVGDVCVFVLLEGIKIEFEVIIF 364 99*********************96..456778***********887645555689********************987665555677666 PP - CS B3 98 r 98 r POO02691.1 365 R 365 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MPSGPREDSN KPTFSSRNPH FFKIILEDTL RENKLRVPKD FVKKCGKTLS NSVSVKLPCG 60 SEWKMKLTEY DNKVWLDNGW PEFVEHYSIG RGNLLTFRYE GNSQFHVVVF DTTTVEIDYP 120 SGPIHFDESN IDGKLREPKR EVISDDFVEF VDDCSPCRKT RVKSSLPCSP PSKRMKASPT 180 GKTQSNLSRP GAKWSHRDGT FVQNRMGRGN SKNSEPDMKG KHDLLATSYG DKSRQKTSKI 240 LGRMKPFKGN EKYAALLKAS GFKSRRPFFK ILMQPSYVHG SRLTIPPNFA ERYIKRKSRN 300 VILKVLDGRT WPVRYTLGVY DRLKTARFRS GWKEFVRNNN IEVGDVCVFV LLEGIKIEFE 360 VIIFRVNGNS KNPMSQAHKG GAILEEPEQS LTNETTSSAT VNDE

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MPSGPREDSN KPTFSSRNPH FFKIILEDTL RENKLRVPKD FVKKCGKTLS NSVSVKLPCG  60
SEWKMKLTEY DNKVWLDNGW PEFVEHYSIG RGNLLTFRYE GNSQFHVVVF DTTTVEIDYP  120
SGPIHFDESN IDGKLREPKR EVISDDFVEF VDDCSPCRKT RVKSSLPCSP PSKRMKASPT  180
GKTQSNLSRP GAKWSHRDGT FVQNRMGRGN SKNSEPDMKG KHDLLATSYG DKSRQKTSKI  240
LGRMKPFKGN EKYAALLKAS GFKSRRPFFK ILMQPSYVHG SRLTIPPNFA ERYIKRKSRN  300
VILKVLDGRT WPVRYTLGVY DRLKTARFRS GWKEFVRNNN IEVGDVCVFV LLEGIKIEFE  360
VIIFRVNGNS KNPMSQAHKG GAILEEPEQS LTNETTSSAT VNDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	8e-49	B3 family protein