PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02690.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 677aa    MW: 76798.8 Da    PI: 8.8885
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02690.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.92.4e-1527112899
                 -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 + +l+++ l++p kf++++g  ++ s  + ++ + g +W++kl   k++++++l++GW +F+k   +k g +v+F+++g+sef  +  +f++
  POO02690.1  27 EETLQENKLRIPQKFVRKYG--EALSDSVFVKLPCGSRWKIKL--AKQDNKIWLEEGWPDFAKHYSIKRGGMVIFRYEGNSEF--HAVIFDT 112
                 45667778***********9..458889***************..**********************************9999..7777765 PP
2B338.52e-12360455197
                 EEEE-...-HHHHT.T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3   1 ffkvlt.psdvlks.grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                 ffk+l+ ps+v+ + + l +p +fa+++ ++  ++ +++l  ++  sW  ++++r    +  l +GW eF+++n L++gD+++Fkl + ++ ++ v+++
  POO02690.1 360 FFKALMePSYVGPKtDHLLVPLDFAARYIKN--QG-DVVLSVPNCSSWFAEFRIRPLNWAARLCNGWHEFANDNSLEVGDICIFKLLDGTKISFEVSIV 455
                 5666651566665468899*********544..33.7***********99998877777799***********************87656665666665 PP
3B355.97.8e-18546647198
                 EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 ffk+ ++s++  s++l +p +fa+ +  +++k+++ +++l  ++grsW+  +++   + +++   + +GWk+Fv +n++++gD+++Fkl++  + ++ v
  POO02690.1 546 FFKIVISSSYRDSNCLNVPVHFAKIYikKYIKKKG-DIVLSVPEGRSWSAHFRFkslKVGKCVAQIYDGWKSFVVDNNVEVGDVCIFKLINVPKISFEV 643
                 899999999999999********777*97776665.9***************998777777778888**********************9887777788 PP

                 EEE- CS
          B3  95 kvfr 98 
                 +++r
  POO02690.1 644 SIVR 647
                 7766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 677 aa     Download sequence    
MSCGPQGDPN QTIYSSETLH FFAVVLEETL QENKLRIPQK FVRKYGEALS DSVFVKLPCG  60
SRWKIKLAKQ DNKIWLEEGW PDFAKHYSIK RGGMVIFRYE GNSEFHAVIF DTSTVEIDYP  120
SIPVHVDKPE LRGPKQEVVE GDSVEILDDF LYCLKAREKS PLQCSQPHKR TRTSPEGESL  180
SNSSDPKSKR SRHSERVLEN SMSKGNLQSS EPEMIGMEKS TLTIICSFES DSDKSTTRRG  240
SIYPILRRIK PRTGRSEKVA ALDKASVFKS RHPFFKVFIQ PSYIYGYDLD NNLEVGDVCV  300
FVLLEDVKTV FEVVIFRADG NSETPISPAL EFGAILEHRL TSIEVARILE RVPFESEKPF  360
FKALMEPSYV GPKTDHLLVP LDFAARYIKN QGDVVLSVPN CSSWFAEFRI RPLNWAARLC  420
NGWHEFANDN SLEVGDICIF KLLDGTKISF EVSIVRFDEY ECGQWSQAHK GGAKHVELEQ  480
RLMNETKSGG TLNGETSTLI SPKSLPEKQA TACIPTHWKT RNKKRLNFIE KSSIPERAPF  540
ESDKPFFKIV ISSSYRDSNC LNVPVHFAKI YIKKYIKKKG DIVLSVPEGR SWSAHFRFKS  600
LKVGKCVAQI YDGWKSFVVD NNVEVGDVCI FKLINVPKIS FEVSIVRVAD DAYRRRTRGG  660
ESSKGGASKQ AKRRCTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-29B3 family protein