PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | POO02679.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | B3 | ||||||||
Protein Properties | Length: 1070aa MW: 120886 Da PI: 6.5563 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 48.9 | 1.2e-15 | 27 | 109 | 8 | 96 |
-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 + +l+++ l++p kf++++g++ s + ++ g +W+++l + ++++++++kGW +F+k Lk g +++F+++g+sef + + POO02679.1 27 EETLQENKLRIPQKFVRKYGES--LSNSVFVKLACGSKWKMEL--KEQDNKIWFEKGWPDFAKHYALKRGSMLIFRYEGNSEF--HAFI 109 45566677***********966..8889***************..**********************************9999..5555 PP | |||||||
2 | B3 | 51.8 | 1.5e-16 | 265 | 360 | 1 | 94 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ffkv +++++ + l +p +fa++h ++k ++ l++ + ++W+v++++ + ++ +++GW +F ++n+L++gD++vF l ++++++++v POO02679.1 265 FFKVVMQPSYIYGSHLDFPHDFANRHLNNKSKDAILIVPNGGRKTWSVNYTFIERENTiiARFQSGWISFSRDNNLEVGDVCVFVLLESTKTTFRV 360 889999999999999***********77765655555555555*******9955555555999**********************98776665555 PP | |||||||
3 | B3 | 50.7 | 3.1e-16 | 453 | 551 | 1 | 97 |
EEEE-...-HHHHT.T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-...TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvl.tpsdvlks.grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvlt...kGWkeFvkangLkegDfvvFkldgrsefelvv 94 ffk+l ps+v+++ ++l lp +f++++ k+++ ++l ++grsW +l+++ + +y+ + kGW eFv++n+L++gD+++Fkl +r+e ++ v POO02679.1 453 FFKTLmQPSYVGSKtDQLPLPLNFVTTYI--KTQG-YVVLSVPNGRSWYAELRMTPPGFSYIVArlcKGWPEFVNDNNLEVGDVCIFKLLDRDEISFEV 548 5566515667766689*********9994..3344.799999**********776666666655677*********************98887777788 PP EEE CS B3 95 kvf 97 +++ POO02679.1 549 SIV 551 776 PP | |||||||
4 | B3 | 52 | 1.3e-16 | 629 | 712 | 5 | 89 |
-..-HHHHT.T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 5 ltpsdvlks.grlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 + + +v+ + ++l lp +f++++ + e+ + l ++grsW+v+l++ ++s++ ++t GW eF+++n+Lk+gD+++Fkl +r POO02679.1 629 MHQTYVGFNcRQLKLPLNFVSKYVKT--EG-YVLLSVPNGRSWNVELKItlGRNSEAKLFT-GWPEFASDNNLKVGDVCIFKLLDRPA 712 4456677773568********99644..33.588889**********88777777777777.********************876543 PP | |||||||
5 | B3 | 51.1 | 2.4e-16 | 794 | 881 | 2 | 89 |
EEE-...-HHHHT.T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 2 fkvlt.psdvlks.grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrse 89 +kvl+ + +v+ + ++l+lp +f++++ + e+ ++l ++grsW+v+l++++++++ l +GW eF+++n+Lk+ D+++Fkl +r POO02679.1 794 CKVLMhQTYVGFNcRQLRLPLNFVTTYVKT--EG-YVVLSVPNGRSWNVELKITRGRNSeARLFTGWPEFASDNNLKVSDVCIFKLLDRPA 881 56665145666663679*******999644..33.69999***********99555555577777********************876543 PP | |||||||
6 | B3 | 57.9 | 1.8e-18 | 959 | 1058 | 1 | 98 |
EEEE-..-HHHHT..T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlks..grlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+kvl++s + + ++l lp +f+ ++ k+++ +++l ++grsW+v+l++ +++ + +l kGW eF+++n+Lk+ D+++Fkl +r e++l POO02679.1 959 FCKVLMQSTYVGRncKLLQLPLNFVMTYI--KTQG-DVVLSVPDGRSWKVELRItppSGSNCVATLDKGWPEFANDNNLKVSDVCIFKLLDRPETSL 1052 8899988865555345569******8884..3344.8***************995555555559999*********************999999999 PP EEEEE- CS B3 93 vvkvfr 98 v+++r POO02679.1 1053 EVSIVR 1058 999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1070 aa Download sequence |
MSCGPQGDHN QAIFSPGTPH FFTVILEETL QENKLRIPQK FVRKYGESLS NSVFVKLACG 60 SKWKMELKEQ DNKIWFEKGW PDFAKHYALK RGSMLIFRYE GNSEFHAFIF DASTVEIEYP 120 SISIDVDKSN VDLELQSPKE KVVEDDYVEI LDDLSPCPKR KEKSPLSCPQ PHKIMRTSPT 180 GKTQSNSAGP NECELESSTS KGNLQSTNPE MIGKPDLLAN SDKDKSTTTT HEIDEIIRHM 240 ETHMYRSEKV ATFQKAIDFK SNRPFFKVVM QPSYIYGSHL DFPHDFANRH LNNKSKDAIL 300 IVPNGGRKTW SVNYTFIERE NTIIARFQSG WISFSRDNNL EVGDVCVFVL LESTKTTFRV 360 VTFHLNGNSK SPISQAHEGG AIQEEAEEDS TNETLPVGAI NNEIGNPSSL ESVPAKQESG 420 CMSTPSKTSQ HQSTSTERAR ILDSIPFKSE RPFFKTLMQP SYVGSKTDQL PLPLNFVTTY 480 IKTQGYVVLS VPNGRSWYAE LRMTPPGFSY IVARLCKGWP EFVNDNNLEV GDVCIFKLLD 540 RDEISFEVSI VRFAEYDCLQ RSQDECATRP SGGTINDEIG EPSSLDSFPA KQSSGCMFNP 600 WKTMTYAEKS RVLNSIPFES ERPFCKVVMH QTYVGFNCRQ LKLPLNFVSK YVKTEGYVLL 660 SVPNGRSWNV ELKITLGRNS EAKLFTGWPE FASDNNLKVG DVCIFKLLDR PAVSFEVFIT 720 RFPEYDCQLW SQGECATRPS GGSLNDEIGE PSSLDSFPAK QTSGCMFTPW KTMTYAEKSR 780 VLDSIPFESE RPFCKVLMHQ TYVGFNCRQL RLPLNFVTTY VKTEGYVVLS VPNGRSWNVE 840 LKITRGRNSE ARLFTGWPEF ASDNNLKVSD VCIFKLLDRP AVSFEVFIAR FPEYDCQLWS 900 QGECATRPSG GAINDEIGEP SSLDNFPAKQ ASRRMSTPSK RSVKAGILDS IHFISERPFC 960 KVLMQSTYVG RNCKLLQLPL NFVMTYIKTQ GDVVLSVPDG RSWKVELRIT PPSGSNCVAT 1020 LDKGWPEFAN DNNLKVSDVC IFKLLDRPET SLEVSIVRFA QYDCNQLIIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 2e-43 | B3 family protein |