PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02667.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 278aa    MW: 31636.8 Da    PI: 7.2833
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02667.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.72.8e-15167262196
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                 ffkv +++++     l++p +fa+++ ++  +  +++l  ++g+ W  +++    + +  r   l +GW+eF++ n+L++gD++ F+l + ++ e  +k
  POO02667.1 167 FFKVVMQPSYVYGYHLYVPLDFATRYIKN--G-GDVVLLVPNGNYWCAQFKTspiSCSN-RsARLCNGWQEFANGNNLEVGDVCFFELLDVDGNEISFK 261
                 556655555555555**********9533..3.38***************886642233.248899*********************876555555544 PP

                 E CS
          B3  96 v 96 
                 v
  POO02667.1 262 V 262
                 4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MKLARQDNKI WLERGWPDFS KHYSLKRGSM LMFRYEGNSE FHAVIFDTST VEIDYPSITL  60
RFDNYDVDLE LPEDDSPCPK ASEKSPLPCS QPYKRMRASP TQSNLSGPNE CVLDRKPDLP  120
DETGRDKSST RRKRECQIVT SIKTPMDRSK NVAALQKASD FKSKCPFFKV VMQPSYVYGY  180
HLYVPLDFAT RYIKNGGDVV LLVPNGNYWC AQFKTSPISC SNRSARLCNG WQEFANGNNL  240
EVGDVCFFEL LDVDGNEISF KVSIFHLAES ASLQQSQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-34B3 family protein