PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02663.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 139aa    MW: 15645.8 Da    PI: 10.2976
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02663.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.35e-1750137799
                 .-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                    +++++r  +p  fa+++ + k++++tl       rsW vkl    ++++y +++GW  F+++n L+ +D+++F+l++r++  l+v++fr+
  POO02663.1  50 ELGHMEHSRQHVPLAFAKRYFEGKAQTMTLW---VGKRSWPVKL--LAYPSAYKFSAGWGAFARENSLRPRDVCIFELTQRNQLDLKVTIFRQ 137
                 55677889999*********65556654444...467*******..*********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MHADKSRKPI SEENTGGQVT QAALSSGVGR ASEAAIHYFS TNPYFQVALE LGHMEHSRQH  60
VPLAFAKRYF EGKAQTMTLW VGKRSWPVKL LAYPSAYKFS AGWGAFAREN SLRPRDVCIF  120
ELTQRNQLDL KVTIFRQAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.11e-19B3 family protein