PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO02661.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Protein Properties

Length: 512aa MW: 57837.8 Da PI: 10.3942

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO02661.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	53.8	3.5e-17	19	110	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ffk+ + + ++++ l +pkkf++++gg+ s + l+ + g +W++ + +k++g++++ +GWk+F++ L gD vvF+++g+s+f +v +f++ POO02661.1 19 FFKIILEETIGNKK-LQIPKKFVTKYGGS--LSSRVFLKLPCGSRWKIGV--TKSDGKVWIDEGWKSFADYYSLSRGDLVVFRYEGNSQF--HVILFDT 110 67777666666665.*********998..7779***********..********************************9999..9988886 PP
2	B3	64.2	1.9e-20	246	343	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 f ++ ps v+ ++ ++lp fa+++ + ++++++l+ ++gr+W+vk+++ +++s + + +GWk F+++n+Lk+gD++vF l++r++ + v++f POO02661.1 246 FMVAMQPSFVGDKSAMILPSLFATKYLRS--KNMDVILKVSDGRTWSVKYSFrlWNGSPKAKFDRGWKAFARENDLKVGDVCVFVLTKRTGILFEVTIF 342 66788899999*************655..6789***********9999******************************9998877888888 PP - CS B3 98 r 98 + POO02661.1 343 S 343 7 PP
3	B3	55.5	1e-17	414	508	3	99
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +v +++ +l ++++ +p +fa+++ +k +++ +tl+ + rsW vkl + ++y +++GW F+k+n L +D+++F+l++r++ l+v++fr+ POO02661.1 414 QVVVQPGHLDQCIVHVPASFAKSFFNK--RTQIMTLQVGTERSWPVKLLAYPSESEYKFSAGWAAFAKENSLMPRDICIFELIKRNQVVLKVSIFRQ 508 6778899999***********9867..45589999*******99999999*************************9999****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MTLGSPIFQK KFCSTSPHFF KIILEETIGN KKLQIPKKFV TKYGGSLSSR VFLKLPCGSR 60 WKIGVTKSDG KVWIDEGWKS FADYYSLSRG DLVVFRYEGN SQFHVILFDT STVERDYLSN 120 PNHFQMHFID GQSHEFVKEE TEDDVSVQVL DRVSPSPNKT RAKSPLACSR PHKKMKTSPF 180 VKTQSDLSPL RSKVKFDLSD EEVGDKSIPP RSMKLEHFAK KQTLNAKQKA EALKRASGFK 240 SKDPFFMVAM QPSFVGDKSA MILPSLFATK YLRSKNMDVI LKVSDGRTWS VKYSFRLWNG 300 SPKAKFDRGW KAFARENDLK VGDVCVFVLT KRTGILFEVT IFSENGVANS NVLPEFEVMP 360 KGSLSIKLES DNTMNKITAM STPWGCRKPL PSSSGVSRAS KAASHFFSTN PHFQVVVQPG 420 HLDQCIVHVP ASFAKSFFNK RTQIMTLQVG TERSWPVKLL AYPSESEYKF SAGWAAFAKE 480 NSLMPRDICI FELIKRNQVV LKVSIFRQTG LA

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MTLGSPIFQK KFCSTSPHFF KIILEETIGN KKLQIPKKFV TKYGGSLSSR VFLKLPCGSR  60
WKIGVTKSDG KVWIDEGWKS FADYYSLSRG DLVVFRYEGN SQFHVILFDT STVERDYLSN  120
PNHFQMHFID GQSHEFVKEE TEDDVSVQVL DRVSPSPNKT RAKSPLACSR PHKKMKTSPF  180
VKTQSDLSPL RSKVKFDLSD EEVGDKSIPP RSMKLEHFAK KQTLNAKQKA EALKRASGFK  240
SKDPFFMVAM QPSFVGDKSA MILPSLFATK YLRSKNMDVI LKVSDGRTWS VKYSFRLWNG  300
SPKAKFDRGW KAFARENDLK VGDVCVFVLT KRTGILFEVT IFSENGVANS NVLPEFEVMP  360
KGSLSIKLES DNTMNKITAM STPWGCRKPL PSSSGVSRAS KAASHFFSTN PHFQVVVQPG  420
HLDQCIVHVP ASFAKSFFNK RTQIMTLQVG TERSWPVKLL AYPSESEYKF SAGWAAFAKE  480
NSLMPRDICI FELIKRNQVV LKVSIFRQTG LA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	3e-50	B3 family protein