PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02658.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 322aa    MW: 37176.3 Da    PI: 9.4723
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02658.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3482.2e-1511861899
                --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                +p  f+++++g+ ++  +  l +++ + W+v++  +k+ +r ++++GW  F k+ngL+ gD +vF++ g+sef  +v ++ k
  POO02658.1 11 IPVAFVKNFDGEIPG--QFHLWNPTKKCWNVNV--EKSNNRLYFQEGWALFLKDNGLEFGDLLVFHYAGKSEF--YVEIYGK 86
                999***888666444..59999***********..********************************998998..9988765 PP
2B353.93.2e-17227321198
                 EEEE-..-HHHHTT-EE--HHH.HTT---...--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkke.esktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 ffk  +   + ++g l +p +f +e+++ k  ++ t+++ + sgrsW vk+++++++    +++GW +F+k+n +k gD++vF+l++  +  +++++fr
  POO02658.1 227 FFKLVMGMAYVTRGYLNIPMSFYKEYMKRKLkQGSTVIF-QHSGRSWPVKFTVNRRPL-ARFSGGWHDFAKDNSIKLGDVCVFELTE--KNVMKISIFR 321
                 788888888899999***********4444404445555.55*********6655554.68999********************864..5556888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MYYTLPLFQH IPVAFVKNFD GEIPGQFHLW NPTKKCWNVN VEKSNNRLYF QEGWALFLKD  60
NGLEFGDLLV FHYAGKSEFY VEIYGKSCCQ KRVVTDSSES GIPLNADREN HNEKKTAEQS  120
EKRDNYGMDE SRAQINLDDL SLKVSNGGIE ASKTTMVKVE VIDLETEDSL PIKRHRPEET  180
KHFEGNSQTR RGRVPSFRSH SGSDTKACER EVRALEAANK YIPKHPFFKL VMGMAYVTRG  240
YLNIPMSFYK EYMKRKLKQG STVIFQHSGR SWPVKFTVNR RPLARFSGGW HDFAKDNSIK  300
LGDVCVFELT EKNVMKISIF RG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-29B3 family protein