PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO02625.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TALE

Protein Properties

Length: 939aa MW: 99887 Da PI: 7.3119

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO02625.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.1	3.4e-09	650	687	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + POO02625.1 650 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 687 664459******************************88 PP
2	BELL	121.3	4.1e-39	510	581	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +r e q++k+kLls+l+eVd+rY++y+eq+q+v++sF+ v+g g+a pYt+lA+ka+SrhFrcLkdai+ q+ POO02625.1 510 DRIEQQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDLVMGFGAAVPYTALAQKAMSRHFRCLKDAISAQL 581 5889*****************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 939 aa Download sequence
MGITTPPIIF SNSKVLHNYS IISSSEKPSH NNNSNSNNNN NKNKNCSSNS MSQDYHHQAP 60 AAGIFSTNTF SNGFERSSVA AASHQDHHQH HIAQQIRRDK LRVQAGFEAA PPPLVGIDED 120 ESGALPVYES AGMLSEMFNF PQGHAAAAEL LDQQQQQQQA MAPPSYRSPR PQQPPHQGGV 180 GNEWYGGRQG MVIVGGGSLA SSLGDNSNSN HNPKNQTSSR DSIAHHHHQQ QQQHHQISSI 240 NADSAAAMQL FLMNPQPRSP SPPPPSAVAA SNSSSTLHML LPNPSTSSLV QAFTPSGTPG 300 GGAFGQFTWI PDTTHEGGGP TNEIGGVPHH HHVAEGQGLS LTLSSSLQPL EASAKAAEEL 360 RMGNTALLYY GGGSSGPEHY PYKNYGAGTT SQVQAQALHL QTGGGGGGVL VGPNQHHHHQ 420 VHVGFGSSLG VVNVLRNSKY VKAAQELLEE FCSVGRGHFK KNKFGTSTRQ NTTNPSANPG 480 TSSGGGGGGG GGGSSSSSKD GVNPPLSAAD RIEQQRRKVK LLSMLDEVDR RYNHYCEQMQ 540 MVVNSFDLVM GFGAAVPYTA LAQKAMSRHF RCLKDAISAQ LKHSCELLGE KDGAGTSGIT 600 KGETPRLKIL EQSLRQQRAF QSIGMMEQEA WRPQRGLPER SVNILRAWLF EHFLHPYPSD 660 ADKHLLARQT GLSRNQVSNW FINARVRLWK PMVEEMYQQE TKEEETLSSD QERSTDHHDH 720 HQMIIRSSRN IINNQNSSTS SGVGGGGHGL LAQTPTPNSS TTAATQATTT PTPQTTTTTT 780 TTTAAAAAAA ARRSDINAIE SDPSLVAISN NNTSIRQPFS ENQAMMKQAH QAIATSSTPS 840 STSELVAPPV SQSYAAAGDD TCLRGGLVAA AEFGTTTTAS GSNINIAAPH PDHHGGGALI 900 AFGTTTTTAG DVSLTLGLRH AGDMPENTPS PFSVRDFGS

Sequence ? help Back to Top

Protein Sequence Length: 939 aa Download sequence

MGITTPPIIF SNSKVLHNYS IISSSEKPSH NNNSNSNNNN NKNKNCSSNS MSQDYHHQAP  60
AAGIFSTNTF SNGFERSSVA AASHQDHHQH HIAQQIRRDK LRVQAGFEAA PPPLVGIDED  120
ESGALPVYES AGMLSEMFNF PQGHAAAAEL LDQQQQQQQA MAPPSYRSPR PQQPPHQGGV  180
GNEWYGGRQG MVIVGGGSLA SSLGDNSNSN HNPKNQTSSR DSIAHHHHQQ QQQHHQISSI  240
NADSAAAMQL FLMNPQPRSP SPPPPSAVAA SNSSSTLHML LPNPSTSSLV QAFTPSGTPG  300
GGAFGQFTWI PDTTHEGGGP TNEIGGVPHH HHVAEGQGLS LTLSSSLQPL EASAKAAEEL  360
RMGNTALLYY GGGSSGPEHY PYKNYGAGTT SQVQAQALHL QTGGGGGGVL VGPNQHHHHQ  420
VHVGFGSSLG VVNVLRNSKY VKAAQELLEE FCSVGRGHFK KNKFGTSTRQ NTTNPSANPG  480
TSSGGGGGGG GGGSSSSSKD GVNPPLSAAD RIEQQRRKVK LLSMLDEVDR RYNHYCEQMQ  540
MVVNSFDLVM GFGAAVPYTA LAQKAMSRHF RCLKDAISAQ LKHSCELLGE KDGAGTSGIT  600
KGETPRLKIL EQSLRQQRAF QSIGMMEQEA WRPQRGLPER SVNILRAWLF EHFLHPYPSD  660
ADKHLLARQT GLSRNQVSNW FINARVRLWK PMVEEMYQQE TKEEETLSSD QERSTDHHDH  720
HQMIIRSSRN IINNQNSSTS SGVGGGGHGL LAQTPTPNSS TTAATQATTT PTPQTTTTTT  780
TTTAAAAAAA ARRSDINAIE SDPSLVAISN NNTSIRQPFS ENQAMMKQAH QAIATSSTPS  840
STSELVAPPV SQSYAAAGDD TCLRGGLVAA AEFGTTTTAS GSNINIAAPH PDHHGGGALI  900
AFGTTTTTAG DVSLTLGLRH AGDMPENTPS PFSVRDFGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-141	TALE family protein