PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO02475.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 444aa MW: 48984.2 Da PI: 9.5869

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO02475.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.5	5.5e-33	185	241	3	60
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers d+++ ei+Y+geHnh+k POO02475.1 185 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSL-DGQIAEIVYKGEHNHSK 241 9*************************************.*************85 PP
2	WRKY	103.9	9e-33	368	424	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+vkg+++prsYYrCts +C+v+k+ver+++dpk++++tYeg+Hnh+ POO02475.1 368 DGFRWRKYGQKVVKGNPYPRSYYRCTSLKCNVRKHVERASDDPKAFVTTYEGKHNHD 424 9*******************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MDVKEARRTV VAKPVASRPS CSSFRSFSEL LAGAINASPS NTSETAVPAI RPKTVRFKSM 60 VEISGAAACS PSDKISKPNG KSNVVYKPLA KVVSKTTVSL LANMGNFNNG FQQIQSLAET 120 QVQHPRQDKD SFRSQLASNL NQNLPLRAET NQTTEPSKMS SASQNQEEEP KSLPSVANGD 180 RPSYDGYNWR KYGQKQVKGS EYPRSYYKCT HPNCPVKKKV ERSLDGQIAE IVYKGEHNHS 240 KPQPPKRSSS GTQVSGLVPD TTGQDTNQQV WTSQLNERNE CSEGRIDSQN EVGLSMHSYH 300 GKASQPYDSL SVELEAGSKG LEAGDDEPRN KRRKGENQSN EAGTSGEGIQ EAKVVVQNSN 360 DLENISGDGF RWRKYGQKVV KGNPYPRSYY RCTSLKCNVR KHVERASDDP KAFVTTYEGK 420 HNHDKPIRNP NPVSSETDTQ VPTT

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MDVKEARRTV VAKPVASRPS CSSFRSFSEL LAGAINASPS NTSETAVPAI RPKTVRFKSM  60
VEISGAAACS PSDKISKPNG KSNVVYKPLA KVVSKTTVSL LANMGNFNNG FQQIQSLAET  120
QVQHPRQDKD SFRSQLASNL NQNLPLRAET NQTTEPSKMS SASQNQEEEP KSLPSVANGD  180
RPSYDGYNWR KYGQKQVKGS EYPRSYYKCT HPNCPVKKKV ERSLDGQIAE IVYKGEHNHS  240
KPQPPKRSSS GTQVSGLVPD TTGQDTNQQV WTSQLNERNE CSEGRIDSQN EVGLSMHSYH  300
GKASQPYDSL SVELEAGSKG LEAGDDEPRN KRRKGENQSN EAGTSGEGIQ EAKVVVQNSN  360
DLENISGDGF RWRKYGQKVV KGNPYPRSYY RCTSLKCNVR KHVERASDDP KAFVTTYEGK  420
HNHDKPIRNP NPVSSETDTQ VPTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37260.1	5e-98	WRKY family protein