PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO02426.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB_related

Protein Properties

Length: 634aa MW: 71108.1 Da PI: 5.9505

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO02426.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.1	1.3e-10	573	625	1	46
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg....kgRtlkqcksrwqk 46 r +WT+eE+++l+++v+++ + W++I + kgRt ++k++w + POO02426.1 573 RVPWTAEEEQKLKEGVQMFSDKrntPWRKILESSShvfkKGRTSSDLKDKWKN 625 789***************999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 634 aa Download sequence
MDDMVASEST LAWVWVIEAV ASFKEVDLSL LQDLVKAAPE IPDDLAKNAK EMVALKCLET 60 LFAAPHNEIT SDVPSTQGLK VGFDFSQSCE DVLKRILQES SVPQLSNWNI YPFLSHKRAC 120 MKKCTLVELK EAILDGTHPY ADFLREKGGL AFPDRAEINT NDYSRDSVTS RPNTTCSDIQ 180 YMRVGVNSDR LTVENMSRQL GENLHSGGTL PSKRASFDLN ADSNGKDGSD KSEQSSVPLV 240 GKEPLGDLSE RDVSVKEREL DLAENQMGSM EQGGILKDGP NECSVTKVSQ KSSSDEFHKI 300 LLKINANAPV MRQGITRDEP CQYLSVDKTN VVREENVCMK CNEAGQMLVC STNNCQLMVH 360 EKCLESPPRF DDNGNFYCPL CAYCSLDITD CLEPKKKCNV ANKKLSACIH MALENLPRGF 420 SNTGQNRDKD HHGKNTEDEY LRERGDNEGF HGEPIANEAN NLNVSIVVEE YKERVVKGCL 480 SVRSFEGQQK EVSGNKDGAS AKNTHLVLFN QGKAIQQEVQ KEQNTDTPKK PIYELDVDGM 540 GISEDDNYES PTRFHKKENH CTILTTPQLK RKRVPWTAEE EQKLKEGVQM FSDKRNTPWR 600 KILESSSHVF KKGRTSSDLK DKWKNMCKRS PKSK

Sequence ? help Back to Top

Protein Sequence Length: 634 aa Download sequence

MDDMVASEST LAWVWVIEAV ASFKEVDLSL LQDLVKAAPE IPDDLAKNAK EMVALKCLET  60
LFAAPHNEIT SDVPSTQGLK VGFDFSQSCE DVLKRILQES SVPQLSNWNI YPFLSHKRAC  120
MKKCTLVELK EAILDGTHPY ADFLREKGGL AFPDRAEINT NDYSRDSVTS RPNTTCSDIQ  180
YMRVGVNSDR LTVENMSRQL GENLHSGGTL PSKRASFDLN ADSNGKDGSD KSEQSSVPLV  240
GKEPLGDLSE RDVSVKEREL DLAENQMGSM EQGGILKDGP NECSVTKVSQ KSSSDEFHKI  300
LLKINANAPV MRQGITRDEP CQYLSVDKTN VVREENVCMK CNEAGQMLVC STNNCQLMVH  360
EKCLESPPRF DDNGNFYCPL CAYCSLDITD CLEPKKKCNV ANKKLSACIH MALENLPRGF  420
SNTGQNRDKD HHGKNTEDEY LRERGDNEGF HGEPIANEAN NLNVSIVVEE YKERVVKGCL  480
SVRSFEGQQK EVSGNKDGAS AKNTHLVLFN QGKAIQQEVQ KEQNTDTPKK PIYELDVDGM  540
GISEDDNYES PTRFHKKENH CTILTTPQLK RKRVPWTAEE EQKLKEGVQM FSDKRNTPWR  600
KILESSSHVF KKGRTSSDLK DKWKNMCKRS PKSK