PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | POO02040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | MYB | ||||||||
Protein Properties | Length: 340aa MW: 38510.8 Da PI: 6.0877 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.8 | 1.4e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 r +WT+ Ed++l +++k +G g W++ +++ g++R +k+c++rw++yl POO02040.1 14 RVAWTAMEDKILTEYIKIHGEGKWRSLPERAGLKRFGKSCRLRWLNYL 61 679*****************************99************97 PP | |||||||
2 | Myb_DNA-binding | 49.3 | 1.1e-15 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++E++l+++++++lG++ W+ Ia +++ gRt++++k++w++ POO02040.1 67 RGNITPDEEDLIIRLHNLLGNR-WSFIAGRLP-GRTDNEIKNYWNT 110 7999******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 340 aa Download sequence |
MGRSTPCSKE GLNRVAWTAM EDKILTEYIK IHGEGKWRSL PERAGLKRFG KSCRLRWLNY 60 LKPGIKRGNI TPDEEDLIIR LHNLLGNRWS FIAGRLPGRT DNEIKNYWNT NIVKKIQANS 120 LKSNHMTSRK PSSNQSSALV PQQPSYKIHN TTTSPVVRTK ATRCTKVVLL HQEPQNKVVL 180 LGHDNEMNGG GSTSIDDHNH DHGHDDHQYF NTSEPPVDEV PSVVDYDYDQ LVNINCDQSF 240 SYVPDKSNFP SRFMNIDFGT DDQDDFLSQF LNIDSGFNDD LTEKIISSSN SKGNSCSKSD 300 KENETFLFSH DMPFGLDLES ATASLIDQAD DDMDWLKGLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 6e-63 | MYB family protein |