PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | POO02027.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | bHLH | ||||||||
Protein Properties | Length: 144aa MW: 15958.3 Da PI: 9.5157 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.5 | 0.00058 | 33 | 72 | 10 | 54 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + R +++ ++ L++l+ + +K + a++L +A+ YI+ L POO02027.1 33 KERKENLGAKIVALQQLVSPY-----GKTDTASVLHEAMGYIQFL 72 566777778899999999998.....9****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence |
MTEHKRSPCS VDQSNFPSLA SKRQKPDLSI STKERKENLG AKIVALQQLV SPYGKTDTAS 60 VLHEAMGYIQ FLHEQVKVLS APYLQSTPPT QMQELEPYNL RSRGLCLVPV SCTLGVARSN 120 GADIWAPIKT TSPKFEKSSI SQFH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G05710.3 | 1e-60 | bHLH family protein |