PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO01632.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 397aa MW: 45280.4 Da PI: 7.9008

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO01632.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.7	1.7e-51	12	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhP+deel+v+yL++kv +++l++ ++i+++d+yk++Pw+Lp+k++ +++ew+fF++r++ky++g+r+nra+ sgyWkatg+dk++l++ +++ POO01632.1 12 LPPGFRFHPSDEELIVHYLRNKVISSPLPA-SIIADIDLYKYNPWELPSKAAFGDEEWFFFTPRERKYPNGSRPNRAAGSGYWKATGTDKHILTScGTK 109 79**************************.89***********888899***********************************997888 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +g+kk Lvfykgr pkg+ktdW+m+eyrl POO01632.1 110 SIGVKKALVFYKGRPPKGVKTDWIMNEYRL 139 9*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MEKELQNAAF QLPPGFRFHP SDEELIVHYL RNKVISSPLP ASIIADIDLY KYNPWELPSK 60 AAFGDEEWFF FTPRERKYPN GSRPNRAAGS GYWKATGTDK HILTSCGTKS IGVKKALVFY 120 KGRPPKGVKT DWIMNEYRLL ESIIWSTTST SKRKGSMRLD DWVLCRVREK INTNNSRNTW 180 EDRINCPSHE HPAGYFDQRL DNDVHNRQTT HPKSSNAPSQ NLEMIIDYLY KDFPMLPYIF 240 STPQLPNCVE TASSTISFQS SCAENPRSCN STHEVEGSKK TNIGQFSSIS ASNDHSLLNP 300 LKSRLGAREN DYESTNNKQL TQKKKAITNI DDHDGREINK SESNPETSTM KNYWGINYET 360 KADHQGPFNG NHDWTTSNLQ LHQETIVQIS GTTGYDL

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MEKELQNAAF QLPPGFRFHP SDEELIVHYL RNKVISSPLP ASIIADIDLY KYNPWELPSK  60
AAFGDEEWFF FTPRERKYPN GSRPNRAAGS GYWKATGTDK HILTSCGTKS IGVKKALVFY  120
KGRPPKGVKT DWIMNEYRLL ESIIWSTTST SKRKGSMRLD DWVLCRVREK INTNNSRNTW  180
EDRINCPSHE HPAGYFDQRL DNDVHNRQTT HPKSSNAPSQ NLEMIIDYLY KDFPMLPYIF  240
STPQLPNCVE TASSTISFQS SCAENPRSCN STHEVEGSKK TNIGQFSSIS ASNDHSLLNP  300
LKSRLGAREN DYESTNNKQL TQKKKAITNI DDHDGREINK SESNPETSTM KNYWGINYET  360
KADHQGPFNG NHDWTTSNLQ LHQETIVQIS GTTGYDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	7e-80	NAC family protein