PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO01125.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 326aa    MW: 36404.8 Da    PI: 4.4455
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO01125.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.57.3e-11139182755
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + ErrRR r+++++  Lr+l+P+      +K++Ka+i+  Av Y+++Lq
  POO01125.1 139 ISERRRRGRMKEKLYALRSLVPNI-----TKMDKASIVGDAVLYVQDLQ 182
                 67*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MENINEIHLH DFIADSNFDQ FIDLIRGENE DQVSNFACGD LIINGSNLIE NNNDRFMGPI  60
NAEIENPVFG FDAAMSTIVS SDPNSLSFIG TLPEYFDGEI MMVGEDDDEN DGEDSSGTTT  120
NTTTTTKKRP KADRSRTLIS ERRRRGRMKE KLYALRSLVP NITKMDKASI VGDAVLYVQD  180
LQTQAKKIKA EIASLEASLE EAERYQGSTE NSKKIKVVKA NDSVANAKTI TQIEMFQVEE  240
RGFYVKVVSN KEEKAAISLY KALESLTNFN VQSSNLATVS DTYVLTFTLT VIKECDQQEP  300
INLPNLKLWV TGAFLNQGFE LKTASF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127145KKRPKADRSRTLISERRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.17e-66bHLH family protein