PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | POO00914.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | MYB | ||||||||
Protein Properties | Length: 976aa MW: 108311 Da PI: 5.1119 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.7 | 2.7e-18 | 38 | 83 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+WT+eEdell +av+ + g++Wk+Ia+++ Rt+ qc +rwqk+l POO00914.1 38 GKWTAEEDELLRRAVEHYKGKNWKKIAECFK-DRTDVQCLHRWQKVL 83 89****************************9.************986 PP | |||||||
2 | Myb_DNA-binding | 57.5 | 3.2e-18 | 89 | 135 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde +v++v+++G + W+ Ia+ ++ gR +kqc++rw+++l POO00914.1 89 KGPWSKEEDEVIVELVNKYGAKKWSMIAEALP-GRIGKQCRERWHNHL 135 79******************************.*************97 PP | |||||||
3 | Myb_DNA-binding | 48.9 | 1.5e-15 | 141 | 183 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE++ l++a++ +G++ W+ + ++ gRt++ +k++w+ POO00914.1 141 KEPWTQEEELALIRAHQIYGNK-WAELTKFLP-GRTDNAIKNHWN 183 679*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 976 aa Download sequence |
MTRLRRTSVK SDGVSNALQK LKPLRGRTSG PTRRSTTGKW TAEEDELLRR AVEHYKGKNW 60 KKIAECFKDR TDVQCLHRWQ KVLNPELIKG PWSKEEDEVI VELVNKYGAK KWSMIAEALP 120 GRIGKQCRER WHNHLNPAIN KEPWTQEEEL ALIRAHQIYG NKWAELTKFL PGRTDNAIKN 180 HWNSSVKKKL ETYLASGLLD QLETYLPQVG NLNSASSLGI QPNNVSGVEE EDSSECSQGS 240 NGVNCAQFEP ITENAASNAG ENFKTEESSC SMGHDLEQFG IYGNATPGIN NSHFGSHDLA 300 MSCLGAPEES SLQLGTSGLN ITSNENRTGS TLLQSTVGFS TDTVENLLVD SVKLERLLIS 360 ENDCSEFTFS ELRGPGCFPQ ENAEKRSNSL GLDGVGSSSL CHCDIESSLT ARTSPLESFV 420 HGKDISQQTL ELEVNPSLRD NFICVDSPTG EADKTDSYPK LDEAKNAPKL VAVDIFSKRN 480 SDSTGTFVSV HENKTHSKAD SLQTIPSIDD DATMQKEEQD LQTLSYEPPR FPRLDIPFFN 540 CDLMESAGDL QHNYSPFGIR QLMIPSASLS SPHCLLVDSP TRDSTPRAVL KHASKSFNSS 600 TTMMKRRLHE ILSPVKERRG ETKLDRESNI RSSSFSCAFS SLESLFDDNG ACRMSISSID 660 DSLLDVTGVD YAFEEGTKRV NKLDSKISEK DESTSNSSDK LEQESIKVDT ELKIDNTDTN 720 FKEQSARVLI EHNLDSQLIV SPRFGHQTNR RLAAAVLTPR SRYSRRLDRS DQGGSLVSVI 780 GKDERCKVPV MSVEFATPSK PLEETTSRAA GNDADIQGTY MIGETPGTQR DLESPSAWKL 840 LHSFLHGPGV DTDIPLQELE YFLSPGMRSY EAFGLMRQMN PGEVLASDPD YPEMSSKTLI 900 SSDDQNLFFK DDYFLHDEKE NFPPPSVLLM DRRVLDFGGC GTETPVKEME NKKFAGSSSS 960 EGTSGPSSSH LMKSCR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11510.2 | 2e-95 | MYB family protein |