PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | POO00011.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | Whirly | ||||||||
Protein Properties | Length: 200aa MW: 22285.1 Da PI: 10.4494 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 71.6 | 1.3e-22 | 109 | 162 | 1 | 54 |
Whirly 1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqs 54 s+yk+kaal+v++++p+f+aldsg++k++++G++ll++a+a+++r ydW++kq POO00011.1 109 SIYKGKAALTVEPRAPEFTALDSGAFKVSKEGFVLLQFAPAAGVRVYDWSRKQF 162 7***************************************************84 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MMMTIRPYSL SYSSSSPFPV TAQNPNMCPS HSFYSPPFPG TNGFNFNISR FSANPNSVRK 60 RLSLKCRQSD YFEQQKFSTT TAPNNDSSFA SQTPPRGGQL PARFFVGHSI YKGKAALTVE 120 PRAPEFTALD SGAFKVSKEG FVLLQFAPAA GVRVYDWSRK QFILPHLIGW SAFANSIKPE 180 DTSRGNNASP RFGGDYEWKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14410.1 | 1e-41 | Whirly family protein |