PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO00010.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WRKY
Protein Properties Length: 298aa    MW: 31995.5 Da    PI: 9.6404
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO00010.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.22.2e-30362159
                ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY  1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                ++Dg++WrKYGqK  kg+++pr+YYrCt + +Cpv+k+v+r+ +d +++++tYeg+Hnh+
  POO00010.1  3 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVSpSCPVRKQVQRCIDDMSILITTYEGTHNHP 62
                58**************************999****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MQMNDGCQWR KYGQKIAKGN PCPRAYYRCT VSPSCPVRKQ VQRCIDDMSI LITTYEGTHN  60
HPLPVSATAM ASTTSAAASM LQSRSTTSSS NNQFLPGGLS SNFFAGPSTT SATLFQSSNI  120
RQPLAQQFYF PNNTSISTTT SHPTVTLDLT VPNPSSSSHL GPRYSSTCLS FSSSSSSSAL  180
PWNIATSYNN NNGYFTNYGI MSQQNKPNPI VGSHGLVINN DRSHSKPPFQ EANNSLYQSY  240
LKNIISTSST TTATTHNHQQ SLTETIAAAT KAITSNPKFQ SALAAALTSF VGKGESGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.12e-41WRKY family protein