PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON99942.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family BBR-BPC
Protein Properties Length: 312aa    MW: 35349.1 Da    PI: 10.0132
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON99942.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind358.11.9e-10913121301
   GAGA_bind   1 mdddgsre.rnkg.yye..............pa.aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkll 82 
                 md+  ++  r+k  yy+              ++ ++l   +++++ms+iaerda+irern+alsek++a+a+rd+af qrd+a+a+++ al+erdn+l+
  PON99942.1   1 MDEGQHETsRHKVdYYRgthspwnmmaqhqvKEpNALV--MNKKIMSIIAERDAAIRERNVALSEKNEALAQRDEAFRQRDEAFAQKDSALMERDNALA 97 
                 77776665799998999999999999877663335666..99********************************************************* PP

   GAGA_bind  83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkks.ekskkkvkk 180
                 al+ ++ s  ++ p + +v +g+k +++  + + p++++ +++ +e+++++a+pi+   +ea ++++ k+ +++k   +k++k ++kk  e+ +++ ++
  PON99942.1  98 ALQIRNGS--MNIPLSDGVQRGVKRMNHPSN-NLPNMAEATYDSKEMQITDAFPITVISSEAIKSRQAKRPKENKGISSKESKPPRKKVaEDLNRRATS 193
                 ****8776..6788999999*******8887.88*********************99999998888888666665555555554444330333344443 PP

   GAGA_bind 181 esaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydl 279
                 +   ++ ++e++s+dl+ln +++Dest+PvPvCsCtG++rqCYkWG+GGWqS+CCtt +SvyPLP+ +++r+aR++grKmS+++f++lL++Laa+G+dl
  PON99942.1 194 D--GTKFRTEWESQDLGLNVITFDESTMPVPVCSCTGVPRQCYKWGSGGWQSSCCTTHMSVYPLPQIPNKRHARMGGRKMSGSVFTRLLSRLAAQGHDL 290
                 3..478********************************************************************************************* PP

   GAGA_bind 280 snpvDLkdhWAkHGtnkfvtir 301
                 s p+DL+++WA+HGtn+++ti+
  PON99942.1 291 SMPLDLREYWARHGTNRYITIK 312
                 *********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MDEGQHETSR HKVDYYRGTH SPWNMMAQHQ VKEPNALVMN KKIMSIIAER DAAIRERNVA  60
LSEKNEALAQ RDEAFRQRDE AFAQKDSALM ERDNALAALQ IRNGSMNIPL SDGVQRGVKR  120
MNHPSNNLPN MAEATYDSKE MQITDAFPIT VISSEAIKSR QAKRPKENKG ISSKESKPPR  180
KKVAEDLNRR ATSDGTKFRT EWESQDLGLN VITFDESTMP VPVCSCTGVP RQCYKWGSGG  240
WQSSCCTTHM SVYPLPQIPN KRHARMGGRK MSGSVFTRLL SRLAAQGHDL SMPLDLREYW  300
ARHGTNRYIT IK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.11e-130BBR-BPC family protein