PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON99873.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

DBB

Protein Properties

Length: 317aa MW: 35306 Da PI: 5.3392

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON99873.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	26	2e-08	3	42	4	37
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 +C+ ++++e++ fC ++ lC+ C H+ H PON99873.1 3 IRCDACDKEEASVFCSADEAALCDGCDRRVHHAnklagkH 42 58**************************996443666666 PP
2	zf-B_box	26.5	1.3e-08	54	92	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 e + C+ ++e ++ lfC++++ lC++C + +Hk Ht PON99873.1 54 ESPLCDICQERRAFLFCQEDRAILCRECDVPIHKAneHT 92 6789*****************************878865 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MKIRCDACDK EEASVFCSAD EAALCDGCDR RVHHANKLAG KHSRFSLLQP AFKESPLCDI 60 CQERRAFLFC QEDRAILCRE CDVPIHKANE HTQKHNRFLL TGLKLSASSS LYQNPSTTST 120 TTTSSEAAIN AGSRTPFSTT TTTKRTRTVS TEISSSSSIE NPFPYGTYKL DEDNSATENG 180 SYSTSSISEY LMETLPGWHV EDFLDPCSSA SINGFCKTDH NNGHSVVIMD DDDDGDFDCN 240 KSSFSSQELA NWVPQLSTQS PQNTTLYHSN NGVFYAPKAD DIMMMFNFNP KWDSDTCCIV 300 PQITSPPSLK RHTHFNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	2e-71	DBB family protein