PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON99760.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family Trihelix
Protein Properties Length: 367aa    MW: 40685.1 Da    PI: 9.7979
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON99760.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix66.55.4e-2166156186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 
                 +W+++e+ aLi+ +r+++ +lrrg+lk+++W+ev++++     +    ++++qC++k+e+l+kry+ + +++++   s+ +s++++f++++
  PON99760.1  66 CWSHDETVALIDSYRDKWYSLRRGNLKATHWQEVADAVsarcPSASPAKTAVQCRHKMEKLRKRYRTELQRARSLpVSRFTSSWVHFKRMD 156
                 7********************************99999666566677899************************97799***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MASPSSPPES SPPPGPPQAV PLAIPAPPLQ SSPSAQAQST ALVVQAQAQA QPTPPSSSSR  60
RLPPPCWSHD ETVALIDSYR DKWYSLRRGN LKATHWQEVA DAVSARCPSA SPAKTAVQCR  120
HKMEKLRKRY RTELQRARSL PVSRFTSSWV HFKRMDSMEK GPTAKPENSD SPGEEEDHEN  180
EEEDEDPDQQ LYEELKYGSN MKSMSKLYRN GVGGIGGGGS SSSGFRIRIP TGVSIAQPGT  240
KLYAKVDPKY GMHPNSMNSG PSFGTKVVRE CNAARPGLGK REREREREKE KDPVAAMVSA  300
IKALGDGFVR MEQMKMEMAR EIETMRMEME MKRTEMILDS QQRIVEAFAK AVSEKKKKTK  360
RMPSPEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.12e-71Trihelix family protein