PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON99746.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 250aa MW: 28010.6 Da PI: 7.3221

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON99746.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.2	1.5e-32	176	234	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk+s +prsYYrCt+++C+vkk+ver +ed ++v++tYeg+Hnh+ PON99746.1 176 LDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHS 234 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MEGERSGGSV VPISYELQVS FSAATPTPVP IQEMGFVQFE DHHHHHHNDH HHHDDHHNVY 60 SFLAPSSHQS TGQLSSSAAA QPLTAGSAST AAAASNSAMG FCHGDLVGRP SWNNNEQMVG 120 TLDPKAVNDE NCTGNASDGS NSWWRNSSAD KNKVKVRRKL REPRFCFQTR SDVDVLDDGY 180 KWRKYGQKVV KNSLHPRSYY RCTHSNCRVK KRVERLSEDC RMVITTYEGR HNHSPSDDSN 240 SSEHECFSSF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	155	161	KVRRKLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44745.1	9e-64	WRKY family protein