PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON99460.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 315aa    MW: 34582 Da    PI: 6.1682
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON99460.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.84.6e-094291154
                CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                r++ +  rE+ RRdr+N+ f eL   l ++     +K++Ka+iL+  ++ +k+L
  PON99460.1 42 RKVQKADREKLRRDRLNEHFLELGNTLDPD----RPKNDKATILTDSIQTLKDL 91
                5677889********************997....79************999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MEQWKPDDFS PASASAPAPS YTRSHSDSRQ RTDVDVDPIA ARKVQKADRE KLRRDRLNEH  60
FLELGNTLDP DRPKNDKATI LTDSIQTLKD LAADVNRLKA EYAALSEESR ELTQEKNELR  120
EEKASLKSDI ESLNVQYQQR VRVMFPWTAI DPSVVMGPPY SYPVPVPVPP GPIPFHPSSQ  180
PFPFFGAQNP GAIPNPCSNF VPYPTPANPQ VEQPTSQYTS TSHISSKQDS KSKSSDQQKG  240
SNAERGDVST DVATDLELKM PGSSAQQDSS SGGGRKGKQS QRKEKTTTDG SSSSRYSSQV  300
LQDSSSNSVS DVPKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.13e-61bHLH family protein