PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON99239.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB

Protein Properties

Length: 406aa MW: 46503.7 Da PI: 5.0488

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON99239.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53	7.8e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++l ++++ +G g+W++ +++ g+ R++k+c++rw +yl PON99239.1 14 RGKWTAEEDKILTNYIQAHGEGSWRSLPKKAGLLRCGKSCRLRWVNYL 61 89****************************99**********97 PP
2	Myb_DNA-binding	54.1	3.6e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ TteE+e ++++ + lG++ W++Ia++++ gRt++++k++w+++l PON99239.1 67 RGNITTEEEETIIKLRNTLGNR-WSLIAKHLP-GRTDNEIKNYWNSHL 112 7999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MGRAPCCEKL GLNRGKWTAE EDKILTNYIQ AHGEGSWRSL PKKAGLLRCG KSCRLRWVNY 60 LKDDLRRGNI TTEEEETIIK LRNTLGNRWS LIAKHLPGRT DNEIKNYWNS HLRRKIYCFT 120 HLGKESLSST TTNHVVPASN IRPSGRRSGR TSRAAMKKNK ATNLTYSTTK RHINQVLPRE 180 KSCSTTPSAE KKDSTVEYLW SKTKGSTSDT TSASVSSRDE AIKTKEEEQL ELEGWLEREI 240 MGLNYILEDG LEENTGGNFT IDEKGFCVDV VTMLELFNEG ESVEFSPPGK EMENKENDNN 300 NDEPEEWLDK EIRRLSDCIL EDQEVEMEMG LHNFGVREEL ERGNWANFID DDHDIICRLS 360 SSHAELSDEE YYWQSCGSSA VNLSLFHGEG DVEWGDQMFS LWQQPN

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MGRAPCCEKL GLNRGKWTAE EDKILTNYIQ AHGEGSWRSL PKKAGLLRCG KSCRLRWVNY  60
LKDDLRRGNI TTEEEETIIK LRNTLGNRWS LIAKHLPGRT DNEIKNYWNS HLRRKIYCFT  120
HLGKESLSST TTNHVVPASN IRPSGRRSGR TSRAAMKKNK ATNLTYSTTK RHINQVLPRE  180
KSCSTTPSAE KKDSTVEYLW SKTKGSTSDT TSASVSSRDE AIKTKEEEQL ELEGWLEREI  240
MGLNYILEDG LEENTGGNFT IDEKGFCVDV VTMLELFNEG ESVEFSPPGK EMENKENDNN  300
NDEPEEWLDK EIRRLSDCIL EDQEVEMEMG LHNFGVREEL ERGNWANFID DDHDIICRLS  360
SSHAELSDEE YYWQSCGSSA VNLSLFHGEG DVEWGDQMFS LWQQPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49330.1	3e-63	MYB family protein