PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON99223.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WRKY
Protein Properties Length: 309aa    MW: 34461.9 Da    PI: 7.166
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON99223.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.33.8e-29157216159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 ++Dgy+WrKYGqK+ ++++ pr+Y++C++a  Cpvkkkv+rsaedp+++++tYegeH h+
  PON99223.1 157 VKDGYQWRKYGQKVTRDNPSPRAYFKCSFApICPVKKKVQRSAEDPSLLVVTYEGEHCHS 216
                 58***************************99***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MESTWLKNSL DLNLNPFQHV VEVPKRELEG DSVNFVGKLV VKEEDGHHVM AEELSRISSE  60
NRKLTEMLTI MCKNYNALRS ELMELKNKNS ENELVSLTPR KRKADSEDND NGLINGSNVN  120
ECSSSDEEYS YKLPKEIKSK ISTVYVQTDS SDKTLLVKDG YQWRKYGQKV TRDNPSPRAY  180
FKCSFAPICP VKKKVQRSAE DPSLLVVTYE GEHCHSHTGP IQHGSLILPI SAAMRSLGST  240
VTLDLVRQAG SNESPKMAPV QQGTDQAPVL QQFLVQQMAS SLTRDPNFTA ALAAAISGRI  300
FDNTRAEKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.11e-82WRKY family protein