PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON99201.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | C2H2 | ||||||||
Protein Properties | Length: 308aa MW: 33868 Da PI: 6.9403 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.3 | 0.00026 | 116 | 138 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H PON99201.1 116 FSCNYCQRKFYSSQALGGHQNAH 138 89*****************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence |
MDQLPSTRTN EPSSCPNTEF DHGHDRDPDH DYDHQDQEDD DHQEKERMIT ANESGKFSLD 60 LNLTGTTTES SNIIDDGLTD NQELNLIDSL AAAAAVAAVA SSPSSEHAAA EPGRVFSCNY 120 CQRKFYSSQA LGGHQNAHKR ERTLAKRSGQ RLLGNDHVMA AAAAFGGHHH HPFFSRRHWS 180 SMASLPLHGA NVYNNRSLGI QVHSMIHKPN SQYHNSCSTM LHGNFGSWPK LPPNSFDQQP 240 AIGKHTTTNG LSSKVSAGRF DVPKTTMIGA SQSGHERING ARYNWCASGA THDHRNDETK 300 KLDLSLKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80730.1 | 5e-33 | C2H2 family protein |