PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON99160.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 626aa    MW: 70052.9 Da    PI: 8.9599
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON99160.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B360.52.8e-1922107899
                 -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 s +l+  rl +p kf+++++g   +s  +tle +sg++W+v l   ++ +  +l  GW  Fv++n ++ gDf++F++dg+  f  +v+vf++
  PON99160.1  22 SANLSAERLKIPTKFVRHMEGR--SSGLVTLEGPSGKTWQVDL--LQQNDDLFLHHGWPAFVRDNYVECGDFLIFRYDGELHF--TVQVFDQ 107
                 66788899********888877..5568***************..888899**************************996666..9999987 PP
2B348.81.2e-15269360296
                 EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 + ++++ +v+ s  l +p +f  +h   ++++++++l++++g+ W+v+    ++   +++l +GW  Fv+ n++k gD+++F+l+g+ ef  +v++
  PON99160.1 269 VRIMKSFNVSGSYTLNIPYQFSMAHL--PNCKVKIVLQNLNGQCWTVNSVPsTRVHTSHTLCGGWMAFVRYNDIKIGDICIFELVGECEF--RVHI 360
                 56667778888899*******98996..4699****************9445555667999*************************9999..5555 PP
3B344.52.8e-14502594196
                 EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                 f+k++++ + + s  l +p +f ++h  +     ++++ l++ +g+ W+v+   + k gr  +++ +GW  Fv+ n+++ gD+++F+l+g+   e++v+
  PON99160.1 502 FVKIMKKFNISGSYTLKIPYQFSTAHlpN----YKTEILLRNIKGECWTVNSVPDSK-GRlvHTFCGGWMAFVRGNDVNIGDICIFELVGK--YEMRVH 593
                 778888888888889********9**533....3468***************44333.33579999*********************9984..444565 PP

                 E CS
          B3  96 v 96 
                 +
  PON99160.1 594 I 594
                 5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 626 aa     Download sequence    
MEREALKMAS GRRRPHFFAF YSANLSAERL KIPTKFVRHM EGRSSGLVTL EGPSGKTWQV  60
DLLQQNDDLF LHHGWPAFVR DNYVECGDFL IFRYDGELHF TVQVFDQSAC EKEAAFHSEC  120
SQDIYDKNSG QKRAREDGMS SSDKIVEGVL KKMRESSSEL YSQQIHRNQE AMFDQCREKG  180
CHCEGTKRCE VANFSKETQL YGNSPKSYAI RSQSEICNEK PALDIVLFKA KALQSLSGDK  240
FNANGGVCVQ MSLAHEVVQS FTSCYPYFVR IMKSFNVSGS YTLNIPYQFS MAHLPNCKVK  300
IVLQNLNGQC WTVNSVPSTR VHTSHTLCGG WMAFVRYNDI KIGDICIFEL VGECEFRVHI  360
LGVGNEGVDC QSGKVAPSRL SAGHAVTSHK SFKGLSKKMR GNSSKVHSKS LKTLDVSDKK  420
VSKKLIEAAF PNDTKKRGSA SKALTKVALC SQSNAANKKL VVHRSRDVED ELGSQARSDL  480
RMMLALDEER AARSFSSCFP NFVKIMKKFN ISGSYTLKIP YQFSTAHLPN YKTEILLRNI  540
KGECWTVNSV PDSKGRLVHT FCGGWMAFVR GNDVNIGDIC IFELVGKYEM RVHISGVGKR  600
GHDLQVGEAT SNELALISST NNHLSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06220.12e-17B3 family protein