PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON99158.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Protein Properties

Length: 424aa MW: 47837.7 Da PI: 6.7824

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON99158.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.5	4.9e-18	34	113	13	98
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++l +pkkf +++kk+ + ++l+ + g +W+v + ++++ +++ GW eF++++gL e+D +vFk++g+s f v +f+ PON99158.1 34 DQQLAIPKKFS--NNLKKKLPEFVSLKGPGGGTWRVGV--ATNDDSLFFKHGWHEFASDHGLAENDLLVFKYSGESHF--GVLIFD 113 4679****7..5566778999***********..*******************************99888..777776 PP
2	B3	48.5	1.6e-15	312	406	3	98
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEEEE- CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvkvfr 98 +++ps+v ++ + lp++ + ++ + +++ +l l+ ++W+ +++y++++++ lt+GW++F+ +n+L+e D++vF+ ++f l vk+fr PON99158.1 312 VIMKPSHVYTRFYVLLPNEWVMKYISLENQ--DLYLRF-GDKEWRTRFNYNRRRRSAGLTSGWNHFAVDNNLEEFDVCVFEPGsPVnNSFCLDVKIFR 406 5799***************999444344..566554.66**************************************54222477777788776 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MGESCLDCSK WAEEIYWAHF QDIHFSQFML SGFDQQLAIP KKFSNNLKKK LPEFVSLKGP 60 GGGTWRVGVA TNDDSLFFKH GWHEFASDHG LAENDLLVFK YSGESHFGVL IFDGQTLCEK 120 EFSYFVKRCG HKRDDHGGNL TKRKSRGTSC DEPNNASSEN VGCTSVEKSR DDDSIWVPPG 180 EPVVTPNPEK KICRKSTVNS LLISSDDDGI MVPSGEPVIT PTADEQVRGR ATSIRPIRAT 240 RRRHAASNGS PPCSGELVSI SDADHTPTKR IGTVYGMQYV SNRRPVSEDE KDYALQLAQA 300 EISEPNSQGL LVIMKPSHVY TRFYVLLPNE WVMKYISLEN QDLYLRFGDK EWRTRFNYNR 360 RRRSAGLTSG WNHFAVDNNL EEFDVCVFEP GSPVNNSFCL DVKIFRVVEE MTPPTAVAFS 420 NIRK

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MGESCLDCSK WAEEIYWAHF QDIHFSQFML SGFDQQLAIP KKFSNNLKKK LPEFVSLKGP  60
GGGTWRVGVA TNDDSLFFKH GWHEFASDHG LAENDLLVFK YSGESHFGVL IFDGQTLCEK  120
EFSYFVKRCG HKRDDHGGNL TKRKSRGTSC DEPNNASSEN VGCTSVEKSR DDDSIWVPPG  180
EPVVTPNPEK KICRKSTVNS LLISSDDDGI MVPSGEPVIT PTADEQVRGR ATSIRPIRAT  240
RRRHAASNGS PPCSGELVSI SDADHTPTKR IGTVYGMQYV SNRRPVSEDE KDYALQLAQA  300
EISEPNSQGL LVIMKPSHVY TRFYVLLPNE WVMKYISLEN QDLYLRFGDK EWRTRFNYNR  360
RRRSAGLTSG WNHFAVDNNL EEFDVCVFEP GSPVNNSFCL DVKIFRVVEE MTPPTAVAFS  420
NIRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	2e-70	B3 family protein